RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 IGKV1D-13A0A0B4J2D9 117 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 IGKV1-13P0DP09 117 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 PSG3Q16557 428 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 C6orf15Q6UXA7 325 aaPredicted RBP10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 SPAG8Q99932 426 aaPredicted RBP10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 MS4A6AQ9H2W1 248 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 MOGAT3Q86VF5 341 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 ELSPBP1Q96BH3 223 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 MED12Q93074 2177 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 TAF1LQ8IZX4 1826 aa10.46□□□□□ -0.73
NEDD4L-208ENST00000456173 TRAV1-1A0A0B4J248 108 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 LMO7DNF2Z398 122 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 GOSR1O95249 250 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 IGLC2P0DOY2 106 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 IGLC3P0DOY3 106 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 LHX2P50458 406 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 RPP25LQ8N5L8 163 aaKnown RBP10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 TMEM171Q8WVE6 324 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 NPIPB3Q92617 1050 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 ATP6V0BQ99437 205 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 A8MWV9 139 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 LOXL3P58215 753 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 ZNF826PQ6ZT77 177 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 CCL17Q92583 94 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 OSTCQ9NRP0 149 aa10.46□□□□□ -0.74
NEDD4L-208ENST00000456173 ADAMTSL1Q8N6G6 1762 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 DLL1O00548 723 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 TMEM170BQ5T4T1 132 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 SBF2Q86WG5 1849 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 PTPRZ1P23471 2315 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 CCL25O15444 150 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 HOXA3O43365 443 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 LILRA1O75019 489 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 HTN1P15515 57 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 ANOS1P23352 680 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 RNPS1Q15287 305 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 ZNF658BQ4V348 819 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 PCSK4Q6UW60 755 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 DNASE2BQ8WZ79 361 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 CLEC7AQ9BXN2 247 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 COL11A2P13942 1736 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 TRAV8-1A0A0A6YYK1 113 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 CCL3P10147 92 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 TNFAIP6P98066 277 aaPredicted RBP10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 C3AR1Q16581 482 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 RBPMS2Q6ZRY4 209 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 Q6ZWC4 215 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 RTN4RL2Q86UN3 420 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 LEAP2Q969E1 77 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 AICDAQ9GZX7 198 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 ATG2BQ96BY7 2078 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 K7EP13 123 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 TNFRSF1AP19438 455 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 TMEM249Q2WGJ8 235 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 ANKRD33Q7Z3H0 272 aa10.45□□□□□ -0.74
NEDD4L-208ENST00000456173 IGHV4-39P01824 125 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 PRSS8Q16651 343 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 SPSB3Q6PJ21 355 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 NFAM1Q8NET5 270 aaPredicted RBP10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 ZNF714Q96N38 554 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 PLSCR4Q9NRQ2 329 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 ONECUT1Q9UBC0 465 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 SCN8AQ9UQD0 1980 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 A0A0J9YW62 118 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 C17orf98A8MV24 154 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 PRDX2P32119 198 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 LINC00305Q7Z4B0 112 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 CTHRC1Q96CG8 243 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 C19orf24Q9BVV8 132 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 AZU1P20160 251 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 SFXN3Q9BWM7 321 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 PPIHO43447 177 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 MOSP00540 346 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 REG1AP05451 166 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 PFN1P07737 140 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 LHFPL1Q86WI0 220 aa10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 MRPL32Q9BYC8 188 aaKnown RBP10.44□□□□□ -0.74
NEDD4L-208ENST00000456173 IGHV1OR21-1A0A087WYE8 117 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 PKIBQ9C010 78 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 TRAV8-4A0A0B4J246 113 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 GNG5P63218 68 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 DLX6P56179 175 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 CCL7P80098 99 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 ORMDL3Q8N138 153 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 FSCN3Q9NQT6 498 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 IGHV3-72A0A0B4J1Y9 119 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 AGFG2O95081 481 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 LEPP41159 167 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 NUP37Q8NFH4 326 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 TIMD4Q96H15 378 aa10.43□□□□□ -0.74
NEDD4L-208ENST00000456173 ATAD5Q96QE3 1844 aa10.42□□□□□ -0.74
NEDD4L-208ENST00000456173 TRGV5A0A0B4J1U4 118 aa10.42□□□□□ -0.74
NEDD4L-208ENST00000456173 SPINT1O43278 529 aa10.42□□□□□ -0.74
NEDD4L-208ENST00000456173 CTSBP07858 339 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms