RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 A0A1B0GW64 132 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 PRSS46E5RG02 174 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 SEC11BP0C7V7 166 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 PAX6P26367 422 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 COMPP49747 757 aaPredicted RBP12.9□□□□□ -0.34
TMEM220-202ENST00000455996 F2RL1P55085 397 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 VWC2Q2TAL6 325 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 FBLN7Q53RD9 439 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.34
TMEM220-202ENST00000455996 SLC24A4Q8NFF2 622 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 PINX1Q96BK5 328 aaKnown RBP12.9□□□□□ -0.34
TMEM220-202ENST00000455996 FOXC2Q99958 501 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
TMEM220-202ENST00000455996 VPS13CQ709C8 3753 aa12.9□□□□□ -0.34
TMEM220-202ENST00000455996 E7EUB6 86 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 IFNA10P01566 189 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 NMBP08949 121 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 OR8U8P0C7N1 319 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 FAM106CPP0CH98 169 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 IGHV4-38-2P0DP08 117 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 SPP1P10451 314 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 NPY1RP25929 384 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 RAB14P61106 215 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 RAB11AP62491 216 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 SSBP2P81877 361 aaPredicted RBP12.89□□□□□ -0.35
TMEM220-202ENST00000455996 MMDQ15546 238 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 C2orf83Q53S99 150 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 GGACTQ9BVM4 153 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 HINT2Q9BX68 163 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 FBXL15Q9H469 300 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 CSMD2Q7Z408 3487 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
TMEM220-202ENST00000455996 FGF16O43320 207 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 AVPP01185 164 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 FAM157CP0CG43 387 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 BPIFB3P59826 476 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 C10orf55Q5SWW7 151 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 RUSC1-AS1Q66K80 236 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 OR8G2PQ6IF36 304 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 SRSF8Q9BRL6 282 aaKnown RBP12.88□□□□□ -0.35
TMEM220-202ENST00000455996 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 KIAA1456Q9P272 454 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 CA2P00918 260 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 TGFAP01135 160 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 IFNA5P01569 189 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 OPN1MWP04001 364 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 OPN1MW2P0DN77 364 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 OPN1MW3P0DN78 364 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 RNASE2P10153 161 aaKnown RBP12.88□□□□□ -0.35
TMEM220-202ENST00000455996 MDKP21741 143 aaPredicted RBP12.88□□□□□ -0.35
TMEM220-202ENST00000455996 CD24P25063 80 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 RPL27AP46776 148 aaKnown RBP12.88□□□□□ -0.35
TMEM220-202ENST00000455996 HES1Q14469 280 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 HNF4GQ14541 408 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 LRRC75BQ2VPJ9 315 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 FAM74A1Q5RGS3 127 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 ETV3LQ6ZN32 361 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 MRPL41Q8IXM3 137 aaKnown RBP12.88□□□□□ -0.35
TMEM220-202ENST00000455996 LILRB2Q8N423 598 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 OR10W1Q8NGF6 305 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 GNPNAT1Q96EK6 184 aaPredicted RBP12.88□□□□□ -0.35
TMEM220-202ENST00000455996 PLA2G2EQ9NZK7 142 aa12.88□□□□□ -0.35
TMEM220-202ENST00000455996 IGHV3OR16-10A0A075B7F0 116 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 IGLC7A0M8Q6 106 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 FNDC10F2Z333 226 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 FCN1O00602 326 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 ACTL6BO94805 426 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 FSHBP01225 129 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 TMEM11P17152 192 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 ATP6V0CP27449 155 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 SULT1A2P50226 295 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 DLK1P80370 383 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 ERHP84090 104 aaKnown RBP12.87□□□□□ -0.35
TMEM220-202ENST00000455996 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 FAM120AOSQ5T036 256 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
TMEM220-202ENST00000455996 MAPK1IP1LQ8NDC0 245 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
TMEM220-202ENST00000455996 A0A0U1RQK1 487 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 TEX22C9J3V5 150 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 FBXO24O75426 580 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 TNXAQ16473 311 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 AANATQ16613 207 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 BRD3OSQ6XYD6 125 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 HSD17B11Q8NBQ5 300 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 ZNF114Q8NC26 417 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 WFDC11Q8NEX6 87 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 RNF141Q8WVD5 230 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 WDR61Q9GZS3 305 aaKnown RBP12.86□□□□□ -0.35
TMEM220-202ENST00000455996 MED9Q9NWA0 146 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 C1RLQ9NZP8 487 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 CR1P17927 2039 aa12.86□□□□□ -0.35
TMEM220-202ENST00000455996 CREBBPQ92793 2442 aa12.85□□□□□ -0.35
TMEM220-202ENST00000455996 PRRC2AP48634 2157 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms