RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 XRCC3O43542 346 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 PGLYRP1O75594 196 aaPredicted RBP11.91□□□□□ -0.5
GPC1-206ENST00000455111 RLN1P04808 185 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 SERPINE2P07093 398 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 DEFA4P12838 97 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 NAT1P18440 290 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 RPS19P39019 145 aaKnown RBP11.91□□□□□ -0.5
GPC1-206ENST00000455111 ODF3L2Q3SX64 289 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 LYSMD2Q8IV50 215 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 GDPD1Q8N9F7 314 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 MOB3AQ96BX8 217 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 CXorf58Q96LI9 332 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 GGTLC1Q9BX51 225 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 QTRT1Q9BXR0 403 aaKnown RBP11.91□□□□□ -0.5
GPC1-206ENST00000455111 UBQLN2Q9UHD9 624 aa11.91□□□□□ -0.5
GPC1-206ENST00000455111 OR2T8A6NH00 312 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 DHFRP00374 187 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 PMP2P02689 132 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 FGF2P09038 288 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 TAS2R20P59543 309 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 CATR1Q13166 79 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 SLC16A13Q7RTY0 426 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 YIPF6Q96EC8 236 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
GPC1-206ENST00000455111 ZNF2Q9BSG1 426 aaPredicted RBP11.9□□□□□ -0.5
GPC1-206ENST00000455111 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 COMMD9Q9P000 198 aa11.9□□□□□ -0.5
GPC1-206ENST00000455111 MRPL27Q9P0M9 148 aaKnown RBP11.9□□□□□ -0.5
GPC1-206ENST00000455111 VPS13DQ5THJ4 4388 aa11.9□□□□□ -0.51
GPC1-206ENST00000455111 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
GPC1-206ENST00000455111 MARCH11A6NNE9 402 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 IGKV1-39P01597 117 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 IGKV1D-39P04432 117 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 TRAPPC2P0DI81 140 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 TRAPPC2BP0DI82 140 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 OR13C7P0DN81 318 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 G6PCP35575 357 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 LPAR6P43657 344 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 ELLP55199 621 aaPredicted RBP11.89□□□□□ -0.51
GPC1-206ENST00000455111 PLET1Q6UQ28 207 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 DMBX1Q8NFW5 382 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 IL17DQ8TAD2 202 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 VN1R17PQ8TDU5 208 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 SCARB1Q8WTV0 552 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 COMMD5Q9GZQ3 224 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 DIABLOQ9NR28 239 aa11.89□□□□□ -0.51
GPC1-206ENST00000455111 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
GPC1-206ENST00000455111 TRAV25A0A0B4J276 109 aa11.88□□□□□ -0.51
GPC1-206ENST00000455111 F2RP25116 425 aa11.88□□□□□ -0.51
GPC1-206ENST00000455111 CBX5P45973 191 aa11.88□□□□□ -0.51
GPC1-206ENST00000455111 LSM3P62310 102 aaKnown RBP11.88□□□□□ -0.51
GPC1-206ENST00000455111 ZNF124Q15973 351 aa11.88□□□□□ -0.51
GPC1-206ENST00000455111 KCTD21Q4G0X4 260 aa11.88□□□□□ -0.51
GPC1-206ENST00000455111 MARC2Q969Z3 335 aa11.88□□□□□ -0.51
GPC1-206ENST00000455111 C5orf66Q9H5L9 145 aa11.88□□□□□ -0.51
GPC1-206ENST00000455111 A0A0J9YWU9 116 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 ZNF207O43670 478 aaKnown RBP11.87□□□□□ -0.51
GPC1-206ENST00000455111 KRASP01116 189 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 EIF4EP06730 217 aaKnown RBP11.87□□□□□ -0.51
GPC1-206ENST00000455111 SLC25A24Q6NUK1 477 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 WFDC3Q8IUB2 231 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 OR1L6Q8NGR2 347 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 LINC00476Q8WZB0 136 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
GPC1-206ENST00000455111 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
GPC1-206ENST00000455111 TSPAN4O14817 238 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 JTBO76095 146 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 CTSGP08311 255 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 HERV-K104P61576 105 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 UBE2NLQ5JXB2 153 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 CADM3Q8N126 398 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 SAMD12Q8N8I0 201 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 OR1L8Q8NGR8 309 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 SPAG8Q99932 426 aaPredicted RBP11.86□□□□□ -0.51
GPC1-206ENST00000455111 AIFM2Q9BRQ8 373 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
GPC1-206ENST00000455111 NDUFA4O00483 81 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 HRH1P35367 487 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 DEFB135Q30KP9 77 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 RBPMS2Q6ZRY4 209 aaKnown RBP11.85□□□□□ -0.51
GPC1-206ENST00000455111 CD300LFQ8TDQ1 290 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 GPX8Q8TED1 209 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 LSM10Q969L4 123 aaKnown RBP11.85□□□□□ -0.51
GPC1-206ENST00000455111 S100A16Q96FQ6 103 aaKnown RBP11.85□□□□□ -0.51
GPC1-206ENST00000455111 BSCL2Q96G97 398 aaPredicted RBP11.85□□□□□ -0.51
GPC1-206ENST00000455111 HINT2Q9BX68 163 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 Q9H521 79 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 TMEM14BQ9NUH8 114 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 C21orf62Q9NYP8 219 aa11.85□□□□□ -0.51
GPC1-206ENST00000455111 I3L2K1 104 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 GPR31O00270 319 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 CTSDP07339 412 aaPredicted RBP11.84□□□□□ -0.51
GPC1-206ENST00000455111 HLA-DMAP28067 261 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 PHLDA2Q53GA4 152 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 TMEM69Q5SWH9 247 aa11.84□□□□□ -0.51
GPC1-206ENST00000455111 THOC7Q6I9Y2 204 aaKnown RBP11.84□□□□□ -0.51
GPC1-206ENST00000455111 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms