RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PSMB3P49720 205 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 RAB13P51153 203 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 OR4F5Q8NH21 305 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 OR4F4Q96R69 305 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 SCRT1Q9BWW7 348 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 CLEC7AQ9BXN2 247 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 MIOXQ9UGB7 285 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 TIMM9Q9Y5J7 89 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 PXMP4Q9Y6I8 212 aa11.11□□□□□ -0.63
CLK3-203ENST00000454830 KIAA0141Q14154 515 aaPredicted RBP11.1□□□□□ -0.63
CLK3-203ENST00000454830 KHDC3LQ587J8 217 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 HILPDAQ9Y5L2 63 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 URGCP-MRPS24S4R325 110 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 IGHV2-70P01814 119 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 GATAD1Q8WUU5 269 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
CLK3-203ENST00000454830 GPR6P46095 362 aaPredicted RBP11.1□□□□□ -0.63
CLK3-203ENST00000454830 ZFP82Q8N141 532 aa11.1□□□□□ -0.63
CLK3-203ENST00000454830 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
CLK3-203ENST00000454830 B2MP61769 119 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 MLANAQ16655 118 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 TEPPQ6URK8 271 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 OR5AN1Q8NGI8 311 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 VSTM2AQ8TAG5 236 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 IGFBPL1Q8WX77 278 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 LIPFP07098 398 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 PRCDQ00LT1 54 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 TNXAQ16473 311 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 PDPNQ86YL7 162 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 MBD3L1Q8WWY6 194 aa11.09□□□□□ -0.63
CLK3-203ENST00000454830 ZNF727A8MUV8 499 aa11.08□□□□□ -0.63
CLK3-203ENST00000454830 PAGE4O60829 102 aa11.08□□□□□ -0.63
CLK3-203ENST00000454830 HES1Q14469 280 aa11.08□□□□□ -0.63
CLK3-203ENST00000454830 TMEM170AQ8WVE7 144 aa11.08□□□□□ -0.63
CLK3-203ENST00000454830 VAX2Q9UIW0 290 aa11.08□□□□□ -0.63
CLK3-203ENST00000454830 IGFBP2P18065 325 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 USF1P22415 310 aaPredicted RBP11.08□□□□□ -0.64
CLK3-203ENST00000454830 TPSG1Q9NRR2 321 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 BET1LQ9NYM9 111 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 COL12A1Q99715 3063 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 MC5RP33032 325 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 DLK1P80370 383 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 C4orf17Q53FE4 359 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
CLK3-203ENST00000454830 FAM24BQ8N5W8 94 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 OR5B3Q8NH48 314 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 RITA1Q96K30 269 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 MGST2Q99735 147 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 TMEM204Q9BSN7 226 aa11.08□□□□□ -0.64
CLK3-203ENST00000454830 ZNF430Q9H8G1 570 aaPredicted RBP11.08□□□□□ -0.64
CLK3-203ENST00000454830 C22orf46C9J442 243 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 GATA2P23769 480 aaPredicted RBP11.07□□□□□ -0.64
CLK3-203ENST00000454830 CD24P25063 80 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 OPRK1P41145 380 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 DLX6P56179 175 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 KLRD1Q13241 179 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 HCP5Q6MZN7 132 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 C2CD4CQ8TF44 421 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
CLK3-203ENST00000454830 PARD6GQ9BYG4 376 aaPredicted RBP11.07□□□□□ -0.64
CLK3-203ENST00000454830 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 LOC105371242A0A075B767 164 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 HLA-DRB5Q30154 266 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 TVP23CQ96ET8 276 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 SSBP3Q9BWW4 388 aaPredicted RBP11.07□□□□□ -0.64
CLK3-203ENST00000454830 IGHV3-21A0A0B4J1V1 117 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 TRAV1-1A0A0B4J248 108 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 OR2C1O95371 312 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 CNTFRP26992 372 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 POU2AF1Q16633 256 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 ZNF841Q6ZN19 808 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 SLC35E3Q7Z769 313 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 ITLN2Q8WWU7 325 aaPredicted RBP11.07□□□□□ -0.64
CLK3-203ENST00000454830 GGTLC1Q9BX51 225 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 LPAR2Q9HBW0 351 aa11.07□□□□□ -0.64
CLK3-203ENST00000454830 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 C19orf84I3L1E1 186 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 ADIRFQ15847 76 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 SLC35E1Q96K37 410 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 MPDU1O75352 247 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 STPG3Q8N7X2 389 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 ZNF596Q8TC21 504 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 ABHD5Q8WTS1 349 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 SAV1Q9H4B6 383 aaPredicted RBP11.06□□□□□ -0.64
CLK3-203ENST00000454830 ZNF257Q9Y2Q1 563 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 MAP1AP78559 2803 aaPredicted RBP11.06□□□□□ -0.64
CLK3-203ENST00000454830 LOC105371267A0A1B0GV96 52 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 A0A1B0GW64 132 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 E7EUB6 86 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
CLK3-203ENST00000454830 OR10J1P30954 320 aa11.06□□□□□ -0.64
CLK3-203ENST00000454830 MEF2BQ02080 365 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms