RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 OR9G1Q8NH87 305 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 OR8B2Q96RD0 313 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 LIN7CQ9NUP9 197 aaKnown RBP3.89□□□□□ -1.79
RIF1-207ENST00000454583 ZNF257Q9Y2Q1 563 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 IGKV1OR2-108A0A075B7D4 117 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 TMEM238LA0A1B0GVL6 79 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 LORP23490 312 aaPredicted RBP3.89□□□□□ -1.79
RIF1-207ENST00000454583 GPR6P46095 362 aaPredicted RBP3.89□□□□□ -1.79
RIF1-207ENST00000454583 SSX2Q16385 188 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 ZNF343Q6P1L6 599 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 C11orf88Q6PI97 169 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 Q6ZS46 218 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 BCL6BQ8N143 479 aaPredicted RBP3.89□□□□□ -1.79
RIF1-207ENST00000454583 RPP25LQ8N5L8 163 aaKnown RBP3.89□□□□□ -1.79
RIF1-207ENST00000454583 OR10G8Q8NGN5 311 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 TMEM186Q96B77 213 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 Q96MF0 132 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 GGACTQ9BVM4 153 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 ZNF702PQ9H963 129 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 KCNIP3Q9Y2W7 256 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 ELOA3CA0A087WX78 387 aaPredicted RBP3.89□□□□□ -1.79
RIF1-207ENST00000454583 NXPH3O95157 252 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 OMGP23515 440 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 RAB7AP51149 207 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 CD81P60033 236 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 UBE2KP61086 200 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 PDPNQ86YL7 162 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 RBM14Q96PK6 669 aaKnown RBP3.89□□□□□ -1.79
RIF1-207ENST00000454583 HIST1H2AAQ96QV6 131 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 GAL3ST2Q9H3Q3 398 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 TMEM242Q9NWH2 141 aa3.89□□□□□ -1.79
RIF1-207ENST00000454583 TEX46H3BTG2 121 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 HSPB6O14558 160 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 SYNGR2O43760 224 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 ENSAO43768 121 aaKnown RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 KBTBD11O94819 623 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 LRRC37A5PQ49AS3 106 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 LRRC10Q5BKY1 277 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 ARSJQ5FYB0 599 aaPredicted RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 TCTEX1D4Q5JR98 221 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 INO80EQ8NBZ0 244 aaPredicted RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 RCC1LQ96I51 464 aaKnown RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 C7orf69Q9H7B7 122 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 KIAA1456Q9P272 454 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 WDR83OSQ9Y284 106 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 DIDO1Q9BTC0 2240 aaKnown RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 IGHV7-81A0A0B4J1V7 117 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 C13orf42A0A1B0GVH6 325 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 A0A1W2PRD5 423 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 A0A1W2PRF3 423 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 A0A1W2PRM7 423 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 B4DSR2 109 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 UMAD1C9J7I0 102 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 NDUFB3O43676 98 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 NUP62P37198 522 aaPredicted RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 NKX2-1P43699 371 aaPredicted RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 COMPP49747 757 aaPredicted RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 FXYD4P59646 89 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 C16orf54Q6UWD8 224 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 TMEM86BQ8N661 226 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 ARL11Q969Q4 196 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 S100A13Q99584 98 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 CLEC7AQ9BXN2 247 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 QTRT1Q9BXR0 403 aaKnown RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 SERTAD4Q9NUC0 356 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 TRGV10A0A0A0MS01 117 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 IGHV3-43A0A0B4J1X8 118 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 PIGBOS1A0A0B4J2F0 54 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 A0A0U1RQK1 487 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 C5orf51A6NDU8 294 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 ZFP92A6NM28 416 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 LINC01548A6NM66 108 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 IFITM10A6NMD0 228 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 MARCH11A6NNE9 402 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 NPFFO15130 113 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 HPRT1P00492 218 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 HLA-DRB1P01911 266 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 HSPB1P04792 205 aaKnown RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 IGHV3-43DP0DP04 118 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 ZNF44P15621 663 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 TMEM11P17152 192 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 CAMLGP49069 296 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 ABHD12Q8N2K0 398 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 SECTM1Q8WVN6 248 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 PERPQ96FX8 193 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 FANCD2OSQ96PS1 177 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 HSPB9Q9BQS6 159 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 SRSF8Q9BRL6 282 aaKnown RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 NKX6-2Q9C056 277 aaPredicted RBP3.88□□□□□ -1.79
RIF1-207ENST00000454583 OR2D2Q9H210 308 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 CACNG5Q9UF02 275 aa3.88□□□□□ -1.79
RIF1-207ENST00000454583 UPK2O00526 184 aa3.87□□□□□ -1.79
RIF1-207ENST00000454583 TNFSF12O43508 249 aa3.87□□□□□ -1.79
RIF1-207ENST00000454583 SOX15O60248 233 aa3.87□□□□□ -1.79
RIF1-207ENST00000454583 SFTA3P0C7M3 94 aa3.87□□□□□ -1.79
RIF1-207ENST00000454583 SAA4P35542 130 aa3.87□□□□□ -1.79
RIF1-207ENST00000454583 SERF2P84101 59 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms