RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 CXCL2P19875 107 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 PAX9P55771 341 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 BLCAPP62952 87 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 NDPQ00604 133 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 AANATQ16613 207 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 VMA21Q3ZAQ7 101 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 AARDQ4LEZ3 155 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 PRSS54Q6PEW0 395 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 TMEM65Q6PI78 240 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 C5orf56Q8N8D9 126 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 OR10W1Q8NGF6 305 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 OR4A16Q8NH70 328 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 MFFQ9GZY8 342 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 RBKSQ9H477 322 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-205ENST00000454569 ZFP57Q9NU63 452 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 COA4Q9NYJ1 87 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 TNFSF18Q9UNG2 199 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 FBXO7Q9Y3I1 522 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 OR51B2Q9Y5P1 312 aa8.7□□□□□ -1.02
SCN9A-205ENST00000454569 RLN2P04090 185 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 APELAP0DMC3 54 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 IAPPP10997 89 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 EGR2P11161 476 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 NKX2-1P43699 371 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 ARHGDIBP52566 201 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 AP2S1P53680 142 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 GNB1P62873 340 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 RPL8P62917 257 aaKnown RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 ZNF345Q14585 488 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 TNXAQ16473 311 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 C19orf35Q6ZS72 473 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 INO80EQ8NBZ0 244 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 FAM103A1Q9BTL3 118 aaKnown RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 GON7Q9BXV9 100 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 WNT10AQ9GZT5 417 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 SLA2Q9H6Q3 261 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 HSPB7Q9UBY9 170 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 FOXA2Q9Y261 457 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 IGHV7-81A0A0B4J1V7 117 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 A0A0D9SG52 128 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 RBMXL2O75526 392 aaKnown RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 DEDDO75618 318 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 SPDEFO95238 335 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 LYL1P12980 280 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 S100A11P31949 105 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 NUP62P37198 522 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 CX3CL1P78423 397 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 SRSF2Q01130 221 aaKnown RBP8.69□□□□□ -1.02
SCN9A-205ENST00000454569 TNFRSF9Q07011 255 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 OR2F1Q13607 317 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 PLGLAQ15195 96 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 ACOT7LQ6ZUV0 252 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 TMUB2Q71RG4 321 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 ZNF429Q86V71 674 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 HINT2Q9BX68 163 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 ARL6Q9H0F7 186 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 POMT1Q9Y6A1 747 aa8.69□□□□□ -1.02
SCN9A-205ENST00000454569 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 DNAJC9-AS1A6NH13 148 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 WRBO00258 174 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 SSSCA1O60232 199 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 SRD5A1P18405 259 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 HNF1AP20823 631 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 VDAC2P45880 294 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-205ENST00000454569 HSPE1P61604 102 aaKnown RBP8.68□□□□□ -1.02
SCN9A-205ENST00000454569 IFITM2Q01629 132 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 OPCMLQ14982 345 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 ASPHD1Q5U4P2 390 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 MMD2Q8IY49 270 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 LILRB2Q8N423 598 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 OR4A5Q8NH83 315 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 VSTM2AQ8TAG5 236 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 AIFM2Q9BRQ8 373 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 NDUFA4L2Q9NRX3 87 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 KIAA1456Q9P272 454 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 PRNDQ9UKY0 176 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 MOB4Q9Y3A3 225 aa8.68□□□□□ -1.02
SCN9A-205ENST00000454569 KANTRA0A1W2PQU2 76 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 MSGN1A6NI15 193 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 TEX22C9J3V5 150 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 H3BP45 60 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 SYNGR2O43760 224 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 IFNA17P01571 189 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 AREGP15514 252 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 COMPP49747 757 aaPredicted RBP8.67□□□□□ -1.02
SCN9A-205ENST00000454569 WT1-ASQ06250 92 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 FXYD3Q14802 87 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
SCN9A-205ENST00000454569 TMEM170AQ8WVE7 144 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 SSMEM1Q8WWF3 244 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 BSCL2Q96G97 398 aaPredicted RBP8.67□□□□□ -1.02
SCN9A-205ENST00000454569 LINC00527Q9UJ94 153 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 CDC42EP3Q9UKI2 254 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 VPREB3Q9UKI3 123 aa8.67□□□□□ -1.02
SCN9A-205ENST00000454569 FAM24AA6NFZ4 105 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 E5RGE8 158 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 RGS13O14921 159 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 HLA-DRB1P01911 266 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 REG1AP05451 166 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms