RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 PLET1Q6UQ28 207 aa12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 LYSMD2Q8IV50 215 aa12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 ISOC1Q96CN7 298 aa12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 ZC4H2Q9NQZ6 224 aa12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 GAR1Q9NY12 217 aaKnown RBP12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 UFC1Q9Y3C8 167 aa12.94□□□□□ -0.34
TNFRSF4-202ENST00000453580 FAM25AB3EWG3 89 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 FAM25CB3EWG5 89 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 FAM25GB3EWG6 89 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 KRASP01116 189 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 OR13C7P0DN81 318 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 MYOD1P15172 320 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 GUCA2BQ16661 112 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 ZNF57Q68EA5 555 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 SPSB3Q6PJ21 355 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 SNX29P2Q8IUI4 249 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 FCAMRQ8WWV6 532 aa12.93□□□□□ -0.34
TNFRSF4-202ENST00000453580 TRAV3A0A0B4J244 114 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 TRAV25A0A0B4J276 109 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 TEX50A0A1B0GTY4 177 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 CGB1A6NKQ9 187 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 IGHV3-23P01764 117 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 LYL1P12980 280 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 ZNF182P17025 639 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 TBPP20226 339 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 HAGHQ16775 308 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 ZNF486Q96H40 463 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 FXYD6Q9H0Q3 95 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 NDUFA4L2Q9NRX3 87 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 OR51B2Q9Y5P1 312 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 STAB2Q8WWQ8 2551 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 DNAH9Q9NYC9 4486 aa12.92□□□□□ -0.34
TNFRSF4-202ENST00000453580 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 ZNF785A8K8V0 405 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 ATG12O94817 140 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 HLA-AP01891 365 aaKnown RBP12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 RPA2P15927 270 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 ELK1P19419 428 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 SLC25A24Q6NUK1 477 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 H2BFWTQ7Z2G1 175 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 BSCL2Q96G97 398 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 HINT2Q9BX68 163 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 F11RQ9Y624 299 aaKnown RBP12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 CEPT1Q9Y6K0 416 aa12.91□□□□□ -0.34
TNFRSF4-202ENST00000453580 MFSD2BA6NFX1 497 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 HPGDSO60760 199 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 GABARAPO95166 117 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 GPR183P32249 361 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 G6PCP35575 357 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 CASC10Q5T4H9 136 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 ADAMTSL5Q6ZMM2 481 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 RBPMS2Q6ZRY4 209 aaKnown RBP12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 C19orf35Q6ZS72 473 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 ARRDC1Q8N5I2 433 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 UXS1Q8NBZ7 420 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 OR10W1Q8NGF6 305 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 OR4A16Q8NH70 328 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 IL17DQ8TAD2 202 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 S4R3C0 116 aa12.9□□□□□ -0.34
TNFRSF4-202ENST00000453580 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 OR11H12B2RN74 326 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 TGOLN2O43493 480 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 WT1-ASQ06250 92 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 ZNF585BQ52M93 769 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 PHLDA2Q53GA4 152 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 TBC1D26Q86UD7 250 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 PLEKHA3Q9HB20 300 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
TNFRSF4-202ENST00000453580 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 OR52B4Q8NGK2 314 aa12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 OR1P1Q8NH06 330 aa12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 ZNF436Q9C0F3 470 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 DAZ1Q9NQZ3 744 aaKnown RBP12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 C21orf62Q9NYP8 219 aa12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 RABL2AQ9UBK7 228 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 RABL2BQ9UNT1 228 aa12.88□□□□□ -0.35
TNFRSF4-202ENST00000453580 NDUFA4O00483 81 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 B3GALNT1O75752 331 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 C8orf88P0DMB2 117 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 PGAM2P15259 253 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 RND3P61587 244 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 MRPS10P82664 201 aaKnown RBP12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 SSBP1Q04837 148 aaKnown RBP12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 CTF1Q16619 201 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 GPR107Q5VW38 600 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 GPR141Q7Z602 305 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 CCDC71LQ8N9Z2 235 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 ZFAND1Q8TCF1 268 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 WDR89Q96FK6 387 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 MRPS26Q9BYN8 205 aaKnown RBP12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 C5orf66Q9H5L9 145 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 SRD5A3Q9H8P0 318 aa12.87□□□□□ -0.35
TNFRSF4-202ENST00000453580 EXTL2Q9UBQ6 330 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms