RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 C11orf1Q9H5F2 150 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PLEKHA3Q9HB20 300 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TNFSF18Q9UNG2 199 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 HIVEP2P31629 2446 aa9.97□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CELSR1Q9NYQ6 3014 aa9.96□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SONP18583 2426 aaKnown RBP9.96□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CSMD1Q96PZ7 3565 aa9.96□□□□□ -0.81
HLA-DPA1-244ENST00000453337 A0A0D9SG52 128 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 INS-IGF2F8WCM5 200 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 ARPC5O15511 151 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 CA2P00918 260 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 IGHV4-59P01825 116 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HLA-DRB1P01911 266 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OPN1MWP04001 364 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OPN1MW2P0DN77 364 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OPN1MW3P0DN78 364 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 IAPPP10997 89 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 MYOD1P15172 320 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 C4BPBP20851 252 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 VDAC2P45880 294 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HOXA1P49639 335 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 PAX9P55771 341 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 CX3CL1P78423 397 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMEM219Q86XT9 240 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OR2C3Q8N628 320 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMEM86BQ8N661 226 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 C5orf56Q8N8D9 126 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 ZC4H2Q9NQZ6 224 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 STRAPQ9Y3F4 350 aaKnown RBP9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 U3KQ87 197 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OTOGQ6ZRI0 2925 aa9.96□□□□□ -0.82
HLA-DPA1-244ENST00000453337 MSGN1A6NI15 193 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SCAF4O95104 1147 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SRD5A1P18405 259 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 RPL12P30050 165 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SNCAP37840 140 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 CAV2P51636 162 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SUB1P53999 127 aaKnown RBP eCLIP9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OR2F1Q13607 317 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SPINK9Q5DT21 86 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SPANXN5Q5MJ07 72 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SIGLECL1Q8N7X8 197 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SRSF12Q8WXF0 261 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 AQP10Q96PS8 301 aa9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 LYRM2Q9NU23 88 aaPredicted RBP9.95□□□□□ -0.82
HLA-DPA1-244ENST00000453337 IGHV7-81A0A0B4J1V7 117 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 FAM24AA6NFZ4 105 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 E7EUB6 86 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HOXA3O43365 443 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMEM50AO95807 157 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 IFNA10P01566 189 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HKR1P10072 659 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HTR2BP41595 481 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 NKX2-5P52952 324 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 RAB11AP62491 216 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 ZNF345Q14585 488 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 LGALSLQ3ZCW2 172 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 C10orf55Q5SWW7 151 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMEM252Q8N6L7 170 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OR10W1Q8NGF6 305 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 GRPEL2Q8TAA5 225 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 ARPC1AQ92747 370 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 VPREB3Q9UKI3 123 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 AKAP9Q99996 3911 aa9.94□□□□□ -0.82
HLA-DPA1-244ENST00000453337 MXRA5Q9NR99 2828 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 CGB1A6NKQ9 187 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 AMY1AP04745 511 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 OR13C7P0DN81 318 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 AP2S1P53680 142 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SSBP2P81877 361 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 BAXQ07812 192 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMEM267Q0VDI3 215 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 STX12Q86Y82 276 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 KCNRGQ8N5I3 272 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 ZNF418Q8TF45 676 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 ABHD5Q8WTS1 349 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMEM68Q96MH6 324 aa9.93□□□□□ -0.82
HLA-DPA1-244ENST00000453337 A0A1B0GW64 132 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 IGLC7A0M8Q6 106 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 RNF222A6NCQ9 220 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TEX22C9J3V5 150 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 H3BP45 60 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 KCNAB3O43448 404 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 CXCL2P19875 107 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 NPY1RP25929 384 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 S100A11P31949 105 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SULT1A1P50225 295 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HBG1P69891 147 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HBG2P69892 147 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 C2orf83Q53S99 150 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMEM14EPQ6UXP3 125 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TMUB2Q71RG4 321 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 C9orf62Q8N4C0 152 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SLC24A4Q8NFF2 622 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SGMS2Q8NHU3 365 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 GSX1Q9H4S2 264 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 TNFRSF19Q9NS68 423 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 PAIP2BQ9ULR5 123 aaKnown RBP9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 HSPB11Q9Y547 144 aa9.92□□□□□ -0.82
HLA-DPA1-244ENST00000453337 SETXQ7Z333 2677 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms