RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	PGLYRP1	O75594	196 aa	Predicted RBP	6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	KRAS	P01116	189 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	CRYGC	P07315	174 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	FOLR2	P14207	255 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	CTRB1	P17538	263 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	GPR183	P32249	361 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	G6PC	P35575	357 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	LPAR6	P43657	344 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	OR2B8P	P59922	312 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	TSPAN5	P62079	268 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	CTRB2	Q6GPI1	263 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	ADAMTSL5	Q6ZMM2	481 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	OR6F1	Q8NGZ6	308 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	BORCS5	Q969J3	196 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	EEF1AKMT3	Q96AZ1	226 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	QTRT1	Q9BXR0	403 aa	Known RBP	6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	NAA50	Q9GZZ1	169 aa	Known RBP	6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	WFDC10A	Q9H1F0	79 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	COMMD9	Q9P000	198 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	ANAPC10	Q9UM13	185 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	NSG2	Q9Y328	171 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	DYNC2H1	Q8NCM8	4307 aa	Known RBP	6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	STARD9	Q9P2P6	4700 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	IGLV11-55	A0A075B6I3	123 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	IGHV3-21	A0A0B4J1V1	117 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859		M0QYG6	137 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	GPR31	O00270	319 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	APOA1	P02647	267 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	SMIM18	P0DKX4	95 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	HIST1H1B	P16401	226 aa	Known RBP	6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	NAT1	P18440	290 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	ELK1	P19419	428 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	F2R	P25116	425 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	MECP2	P51608	486 aa	Known RBP	6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	DHRS11	Q6UWP2	260 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	LYSMD2	Q8IV50	215 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	CMTM1	Q8IZ96	169 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	MUC7	Q8TAX7	377 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	CD300LF	Q8TDQ1	290 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	GPX8	Q8TED1	209 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	FCAMR	Q8WWV6	532 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	DGCR14	Q96DF8	476 aa	Known RBP	6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	WDR89	Q96FK6	387 aa	Predicted RBP	6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	NEURL2	Q9BR09	285 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	PLEKHA2	Q9HB19	425 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	RETN	Q9HD89	108 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	C19orf73	Q9NVV2	129 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	DMRT1	Q9Y5R6	373 aa		6.56	□□□□□ -1.36
RFX3-209	ENST00000451859	TEX50	A0A1B0GTY4	177 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	SNAPC5	O75971	98 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	TPPP	O94811	219 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	SCAF4	O95104	1147 aa	Known RBP	6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	CLEC3B	P05452	202 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	CD7	P09564	240 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	TRAPPC2	P0DI81	140 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	TRAPPC2B	P0DI82	140 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	OR13C7	P0DN81	318 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	RCVRN	P35243	200 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	RORC	P51449	518 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	POU2AF1	Q16633	256 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	HAGH	Q16775	308 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	DEFB114	Q30KQ6	69 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	TM4SF20	Q53R12	229 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	FAM209B	Q5JX69	171 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	ZFAND6	Q6FIF0	208 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	SLC25A24	Q6NUK1	477 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	TBC1D26	Q86UD7	250 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	DEFB125	Q8N687	156 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	OR1L8	Q8NGR8	309 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	CXorf58	Q96LI9	332 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	FAM110A	Q9BQ89	295 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	TM2D3	Q9BRN9	247 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	THAP7	Q9BT49	309 aa	Predicted RBP	6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	PALMD	Q9NP74	551 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	SLC2A8	Q9NY64	477 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	SIGLEC8	Q9NYZ4	499 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	OR51B2	Q9Y5P1	312 aa		6.55	□□□□□ -1.36
RFX3-209	ENST00000451859	TENM2	Q9NT68	2774 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	SACS	Q9NZJ4	4579 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	IGHV3OR16-8	A0A075B7F1	116 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	TRBV7-1	A0A0A6YYK4	115 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	TMEM213	A2RRL7	107 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	OR2T8	A6NH00	312 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	ZNF785	A8K8V0	405 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	C3orf84	H3BNL1	204 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	PGAM2	P15259	253 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	PI3	P19957	117 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	CBLN1	P23435	193 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	S100G	P29377	79 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	PPP5C	P53041	499 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	WT1-AS	Q06250	92 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	FAM106A	Q4KMX7	169 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	ZNF585B	Q52M93	769 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	GPR107	Q5VW38	600 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	MZT2A	Q6P582	158 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	PLET1	Q6UQ28	207 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	BTNL8	Q6UX41	500 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	UNQ9165/PRO28630	Q6UXU0	137 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	GPHB5	Q86YW7	130 aa		6.54	□□□□□ -1.36
RFX3-209	ENST00000451859	TMEM61	Q8N0U2	210 aa		6.54	□□□□□ -1.36

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