RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SCGB1D2O95969 90 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 OR9G9P0C7N8 305 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 EGR2P11161 476 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-202ENST00000451053 PVALBP20472 110 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-202ENST00000451053 MAS1LP35410 378 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 KRTAP10-3P60369 221 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 S100A10P60903 97 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 RPL8P62917 257 aaKnown RBP10.26□□□□□ -0.77
VPS33A-202ENST00000451053 ID3Q02535 119 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 IL15RAQ13261 267 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 FXYD3Q14802 87 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 TNXAQ16473 311 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 C10orf99Q6UWK7 81 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 ZNF562Q6V9R5 426 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 Q6ZRM9 215 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 OR52E5Q8NH55 327 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 THAP6Q8TBB0 222 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 ABHD5Q8WTS1 349 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 FAM103A1Q9BTL3 118 aaKnown RBP10.26□□□□□ -0.77
VPS33A-202ENST00000451053 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
VPS33A-202ENST00000451053 AP4M1O00189 453 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 ACTL6BO94805 426 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 MPC2O95563 127 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 IFNA17P01571 189 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 MBPP02686 304 aaPredicted RBP10.25□□□□□ -0.77
VPS33A-202ENST00000451053 C1QBP02746 253 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 MYOD1P15172 320 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 OR2B8PP59922 312 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 SPCS3P61009 180 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 TNFRSF9Q07011 255 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 RAB32Q13637 225 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 IZUMO4Q1ZYL8 232 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 LRRC37A5PQ49AS3 106 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 C10orf55Q5SWW7 151 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 STPG2Q8N412 459 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 OR5B3Q8NH48 314 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 GRPEL2Q8TAA5 225 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 WFDC12Q8WWY7 111 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 ARPC1AQ92747 370 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 COMMD5Q9GZQ3 224 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 TMEM14BQ9NUH8 114 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 LSM5Q9Y4Y9 91 aaKnown RBP10.25□□□□□ -0.77
VPS33A-202ENST00000451053 OR51B2Q9Y5P1 312 aa10.25□□□□□ -0.77
VPS33A-202ENST00000451053 ATRQ13535 2644 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 G3V318 75 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 K7EPK0 472 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 CNIH1O95406 144 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 IGF1P05019 195 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 ECSCRQ19T08 205 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 PDLIM3Q53GG5 364 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-202ENST00000451053 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-202ENST00000451053 C11orf87Q6NUJ2 197 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 PRSS54Q6PEW0 395 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 C12orf54Q6X4T0 127 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 MRPL41Q8IXM3 137 aaKnown RBP10.24□□□□□ -0.77
VPS33A-202ENST00000451053 WIPF2Q8TF74 440 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-202ENST00000451053 HYLS1Q96M11 299 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 CIB3Q96Q77 187 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-202ENST00000451053 RAB40CQ96S21 281 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 QTRT1Q9BXR0 403 aaKnown RBP10.24□□□□□ -0.77
VPS33A-202ENST00000451053 NSG2Q9Y328 171 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
VPS33A-202ENST00000451053 TET2Q6N021 2002 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-202ENST00000451053 TRAV41A0A0B4J266 112 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 A0A1B0GW64 132 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 PSMB11A5LHX3 300 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 E5RGE8 158 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 L7N2F9 121 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 PLXNB1O43157 2135 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 SYNGR2O43760 224 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 DEDDO75618 318 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 OPN1MWP04001 364 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 HNRNPCP07910 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS33A-202ENST00000451053 OPN1MW2P0DN77 364 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 OPN1MW3P0DN78 364 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 SLC25A4P12235 298 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 CRIP2P52943 208 aaPredicted RBP10.23□□□□□ -0.77
VPS33A-202ENST00000451053 HSPE1P61604 102 aaKnown RBP10.23□□□□□ -0.77
VPS33A-202ENST00000451053 VAMP2P63027 116 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 CFHR3Q02985 330 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 C19orf54Q5BKX5 351 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 HIST2H2BDQ6DRA6 164 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 CENPVQ7Z7K6 275 aaPredicted RBP10.23□□□□□ -0.77
VPS33A-202ENST00000451053 ZNF329Q86UD4 541 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 OR1L8Q8NGR8 309 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 SGMS2Q8NHU3 365 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 SRSF12Q8WXF0 261 aaKnown RBP10.23□□□□□ -0.77
VPS33A-202ENST00000451053 WDR89Q96FK6 387 aaPredicted RBP10.23□□□□□ -0.77
VPS33A-202ENST00000451053 ENY2Q9NPA8 101 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 ZNF580Q9UK33 172 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 TNCP24821 2201 aa10.23□□□□□ -0.77
VPS33A-202ENST00000451053 TRAV14DV4A0A0A6YYC5 116 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 MSGN1A6NI15 193 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 CEBPZOSA8MTT3 80 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 E7EUB6 86 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 SSSCA1O60232 199 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 NXPH3O95157 252 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 APELAP0DMC3 54 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms