RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TECRQ9NZ01 308 aaKnown RBP11.57□□□□□ -0.56
CHD3-205ENST00000449744 CLEC3BP05452 202 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 SMIM18P0DKX4 95 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 ZNF182P17025 639 aaPredicted RBP11.56□□□□□ -0.56
CHD3-205ENST00000449744 GPR183P32249 361 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 CD81P60033 236 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 ZNF585BQ52M93 769 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 RNASE12Q5GAN4 147 aaKnown RBP11.56□□□□□ -0.56
CHD3-205ENST00000449744 GPR107Q5VW38 600 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 SLC25A24Q6NUK1 477 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 TBC1D26Q86UD7 250 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 SLC38A6Q8IZM9 456 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 GDPD1Q8N9F7 314 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 LSM10Q969L4 123 aaKnown RBP11.56□□□□□ -0.56
CHD3-205ENST00000449744 TSC22D3Q99576 134 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 TM2D3Q9BRN9 247 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 ZC4H2Q9NQZ6 224 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 FKBP11Q9NYL4 201 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 PRNDQ9UKY0 176 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 OR51B2Q9Y5P1 312 aa11.56□□□□□ -0.56
CHD3-205ENST00000449744 TPPPO94811 219 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 IFNA6P05013 189 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 SERPINE2P07093 398 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 CBLN1P23435 193 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 PTBP1P26599 531 aaKnown RBP eCLIP11.55□□□□□ -0.561e-13■■■■■ 31.4
CHD3-205ENST00000449744 UCP3P55916 312 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 CTF1Q16619 201 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 PLET1Q6UQ28 207 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 CADM3Q8N126 398 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 ZNF502Q8TBZ5 544 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 TMEM56Q96MV1 263 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 NEURL2Q9BR09 285 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 PALMDQ9NP74 551 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 EXTL2Q9UBQ6 330 aa11.55□□□□□ -0.56
CHD3-205ENST00000449744 ZNF785A8K8V0 405 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 M0QYG6 137 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 EDN2P20800 178 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 WT1-ASQ06250 92 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 RNASE10Q5GAN6 216 aaKnown RBP11.54□□□□□ -0.56
CHD3-205ENST00000449744 ZNF57Q68EA5 555 aaPredicted RBP11.54□□□□□ -0.56
CHD3-205ENST00000449744 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 OR5B3Q8NH48 314 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 C15orf40Q8WUR7 153 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 CACNG8Q8WXS5 425 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 MRPS26Q9BYN8 205 aaKnown RBP11.54□□□□□ -0.56
CHD3-205ENST00000449744 PLEKHA3Q9HB20 300 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 NDUFA4L2Q9NRX3 87 aa11.54□□□□□ -0.56
CHD3-205ENST00000449744 FAM212BQ9NTI7 297 aaPredicted RBP11.54□□□□□ -0.56
CHD3-205ENST00000449744 TMEM213A2RRL7 107 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 A8MWP6 167 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 PGAM2P15259 253 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 HAGHQ16775 308 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 H2BFWTQ7Z2G1 175 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 UXS1Q8NBZ7 420 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 OR1L6Q8NGR2 347 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 MARC2Q969Z3 335 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 WDR89Q96FK6 387 aaPredicted RBP11.53□□□□□ -0.56
CHD3-205ENST00000449744 KLK11Q9UBX7 282 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 UFC1Q9Y3C8 167 aa11.53□□□□□ -0.56
CHD3-205ENST00000449744 F11RQ9Y624 299 aaKnown RBP11.53□□□□□ -0.56
CHD3-205ENST00000449744 C15orf61A6NNL5 157 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 TGOLN2O43493 480 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 CD7P09564 240 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 OR52I2Q8NH67 350 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 CITED4Q96RK1 184 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 SELENOKQ9Y6D0 94 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 RYR3Q15413 4870 aa11.52□□□□□ -0.57
CHD3-205ENST00000449744 HUWE1Q7Z6Z7 4374 aaKnown RBP11.51□□□□□ -0.57
CHD3-205ENST00000449744 IGHV3-21A0A0B4J1V1 117 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 OR11H12B2RN74 326 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 RGS5O15539 181 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 CD3DP04234 171 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 TBPP20226 339 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 ELLP55199 621 aaPredicted RBP11.51□□□□□ -0.57
CHD3-205ENST00000449744 TM4SF20Q53R12 229 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 UNQ9165/PRO28630Q6UXU0 137 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 SLC16A13Q7RTY0 426 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 TMEM61Q8N0U2 210 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 ARRDC1Q8N5I2 433 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 DEFB125Q8N687 156 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 MRGPRFQ96AM1 343 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
CHD3-205ENST00000449744 SEC22AQ96IW7 307 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 TMEM14BQ9NUH8 114 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 MRPL27Q9P0M9 148 aaKnown RBP11.51□□□□□ -0.57
CHD3-205ENST00000449744 MTFP1Q9UDX5 166 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 MLXQ9UH92 298 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 CEPT1Q9Y6K0 416 aa11.51□□□□□ -0.57
CHD3-205ENST00000449744 OR2T8A6NH00 312 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 LYL1P12980 280 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 ANKRD55Q3KP44 614 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 Q56UQ5 140 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms