RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 DEFA4P12838 97 aa13.07□□□□□ -0.32
AP000253.1-201ENST00000449339 PRCDQ00LT1 54 aa13.07□□□□□ -0.32
AP000253.1-201ENST00000449339 FLI1Q01543 452 aaPredicted RBP13.07□□□□□ -0.32
AP000253.1-201ENST00000449339 FAM90A2PQ658T7 463 aa13.07□□□□□ -0.32
AP000253.1-201ENST00000449339 FAM71F2Q6NXP2 309 aa13.07□□□□□ -0.32
AP000253.1-201ENST00000449339 OR9G1Q8NH87 305 aa13.07□□□□□ -0.32
AP000253.1-201ENST00000449339 TMPRSS5Q9H3S3 457 aa13.07□□□□□ -0.32
AP000253.1-201ENST00000449339 A0A1W2PPE2 198 aa13.06□□□□□ -0.32
AP000253.1-201ENST00000449339 ST6GALNAC6Q969X2 333 aa13.06□□□□□ -0.32
AP000253.1-201ENST00000449339 FLYWCH2Q96CP2 140 aaKnown RBP13.06□□□□□ -0.32
AP000253.1-201ENST00000449339 TVP23CQ96ET8 276 aa13.06□□□□□ -0.32
AP000253.1-201ENST00000449339 NPVFQ9HCQ7 196 aa13.06□□□□□ -0.32
AP000253.1-201ENST00000449339 FKBP11Q9NYL4 201 aa13.06□□□□□ -0.32
AP000253.1-201ENST00000449339 TEX50A0A1B0GTY4 177 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 SOX15O60248 233 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 TMEM177Q53S58 311 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 GCSAMLQ5JQS6 135 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 SLC35E3Q7Z769 313 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 OR4C13Q8NGP0 309 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 OR5B3Q8NH48 314 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 HIST1H2BAQ96A08 127 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 MGST2Q99735 147 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 FSTL3O95633 263 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 OPRK1P41145 380 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 ZNF137PP52743 207 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 LINC00469Q8N7U9 141 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 NEU4Q8WWR8 484 aaPredicted RBP13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 NABP2Q9BQ15 211 aa13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 LSM4Q9Y4Z0 139 aaKnown RBP13.05□□□□□ -0.32
AP000253.1-201ENST00000449339 A0A1W2PPH5 198 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 MT-ND4LP03901 98 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 WDR25Q64LD2 544 aaPredicted RBP13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 PDPNQ86YL7 162 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 OR8B3Q8NGG8 313 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 OR8B2Q96RD0 313 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 GGTLC1Q9BX51 225 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 TMEM133Q9H2Q1 129 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 USP9XQ93008 2570 aaPredicted RBP13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 ZNF98A6NK75 572 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 SEC14L6B5MCN3 397 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 IGFBP2P18065 325 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 PSMB3P49720 205 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 CD81P60033 236 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 TGIF2LXQ8IUE1 241 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 RAB1CQ92928 201 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 C1orf159Q96HA4 380 aa13.04□□□□□ -0.32
AP000253.1-201ENST00000449339 PPIAL4CA0A0B4J2A2 164 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 PPIAL4GP0DN37 164 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 TEPPQ6URK8 271 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 NEIL1Q96FI4 390 aaPredicted RBP13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 TIMD4Q96H15 378 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 BBC3Q96PG8 261 aaPredicted RBP13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 MIOXQ9UGB7 285 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 COL12A1Q99715 3063 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 C22orf46C9J442 243 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 YIF1AO95070 293 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 OR2C1O95371 312 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 RNF224P0DH78 156 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 FOLR2P14207 255 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 RPL8P62917 257 aaKnown RBP13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 PCGF1Q9BSM1 259 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 COMMD5Q9GZQ3 224 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 PATZ1Q9HBE1 687 aaKnown RBP13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 WASHC3Q9Y3C0 194 aa13.03□□□□□ -0.32
AP000253.1-201ENST00000449339 A0A087WWC5 75 aa13.02□□□□□ -0.33
AP000253.1-201ENST00000449339 A6NNC1 897 aa13.02□□□□□ -0.33
AP000253.1-201ENST00000449339 USF1P22415 310 aaPredicted RBP13.02□□□□□ -0.33
AP000253.1-201ENST00000449339 RAB13P51153 203 aa13.02□□□□□ -0.33
AP000253.1-201ENST00000449339 GATAD1Q8WUU5 269 aa13.02□□□□□ -0.33
AP000253.1-201ENST00000449339 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 IL3RAP26951 378 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 OR10W1Q8NGF6 305 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 VSTM2AQ8TAG5 236 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 SSMEM1Q8WWF3 244 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 CHODLQ9H9P2 273 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 NDUFA4L2Q9NRX3 87 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 KCNIP2Q9NS61 270 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 MYO18BQ8IUG5 2567 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 IGHV2-26A0A0B4J1V2 119 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 ZNF727A8MUV8 499 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 COX7A1P24310 79 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 MC5RP33032 325 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 ATP5IP56385 69 aaPredicted RBP13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 PNRC1Q12796 327 aaPredicted RBP13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 RNF212Q495C1 297 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 ONECUT1Q9UBC0 465 aa13.01□□□□□ -0.33
AP000253.1-201ENST00000449339 FNDC10F2Z333 226 aa13□□□□□ -0.33
AP000253.1-201ENST00000449339 RAB31Q13636 194 aa13□□□□□ -0.33
AP000253.1-201ENST00000449339 BSXQ3C1V8 233 aa13□□□□□ -0.33
AP000253.1-201ENST00000449339 C2orf83Q53S99 150 aa13□□□□□ -0.33
AP000253.1-201ENST00000449339 ZFP82Q8N141 532 aa13□□□□□ -0.33
AP000253.1-201ENST00000449339 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms