RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 UBE2KP61086 200 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 ERVK-16P61578 105 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 PLGLAQ15195 96 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 POU2AF1Q16633 256 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 C5orf64Q2M2E5 130 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 VMA21Q3ZAQ7 101 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 C10orf55Q5SWW7 151 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 Q6ZRM9 215 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 C12orf45Q8N5I9 185 aaPredicted RBP10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 MINDY2Q8NBR6 621 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 RNASE11Q8TAA1 199 aaKnown RBP10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 GPR146Q96CH1 333 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 RNF5Q99942 180 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 HSPB9Q9BQS6 159 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 GPN1Q9HCN4 374 aaPredicted RBP10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 KIAA1456Q9P272 454 aa10.68□□□□□ -0.7
PDLIM2-213ENST00000448520 DBX1A6NMT0 343 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 C3orf84H3BNL1 204 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 UPK2O00526 184 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 KBTBD11O94819 623 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 OR2A4O95047 310 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 NXPH3O95157 252 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 SPDEFO95238 335 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 CA2P00918 260 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 FHL3Q13643 280 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 GGNBP1Q5YKI7 109 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 TMEM65Q6PI78 240 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 H2BFWTQ7Z2G1 175 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 FAM219AQ8IW50 185 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 LRTM2Q8N967 370 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 OR11H1Q8NG94 326 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 COQ8AQ8NI60 647 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 IL22RA2Q969J5 263 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 UBE2E2Q96LR5 201 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 OR2A7Q96R45 310 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 PRR25Q96S07 402 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 OR51J1Q9H342 316 aa10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
PDLIM2-213ENST00000448520 TNCP24821 2201 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 A0A0B4J2A0 478 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 SNRPGP15A8MWD9 76 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 CREBL2O60519 120 aaPredicted RBP10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 IL6RP08887 468 aaPredicted RBP10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 OR8U8P0C7N1 319 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 GNB1P62873 340 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 SRPXP78539 464 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 NDPQ00604 133 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 RUNX1Q01196 453 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 PRSS8Q16651 343 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 NMSQ5H8A3 153 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 Q6ZNX1 250 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 TEX45Q8NA69 505 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 TMEM167AQ8TBQ9 72 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 PHB2Q99623 299 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 CACNG5Q9UF02 275 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 SHPKQ9UHJ6 478 aa10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 ZNF256Q9Y2P7 627 aaPredicted RBP10.66□□□□□ -0.7
PDLIM2-213ENST00000448520 hCG_2014768A0A024R1R8 64 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 A0A1B0GVG6 124 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 SIX6O95475 246 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 PPIFP30405 207 aaKnown RBP10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 TNXAQ16473 311 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 PPP1R27Q86WC6 154 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 ZNF491Q8N8L2 437 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 OR1N2Q8NGR9 330 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 MYOZ3Q8TDC0 251 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 RRNAD1Q96FB5 475 aaKnown RBP10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 WDR89Q96FK6 387 aaPredicted RBP10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 FAM103A1Q9BTL3 118 aaKnown RBP10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 QTRT1Q9BXR0 403 aaKnown RBP10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 FBXO7Q9Y3I1 522 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 SMAD5-AS1Q9Y6J3 95 aa10.65□□□□□ -0.7
PDLIM2-213ENST00000448520 IGHV7-81A0A0B4J1V7 117 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 A0A1B0GW64 132 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 E7EUB6 86 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 I3L521 148 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 GOSR2O14653 212 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 SSNA1O43805 119 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 APELAP0DMC3 54 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 CX3CL1P78423 397 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 ZNF616Q08AN1 781 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 KIAA0141Q14154 515 aaPredicted RBP10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 SPINK9Q5DT21 86 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 ZNF429Q86V71 674 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 LSM10Q969L4 123 aaKnown RBP10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 OR10C1Q96KK4 312 aa10.64□□□□□ -0.71
PDLIM2-213ENST00000448520 C13orf42A0A1B0GVH6 325 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 DUXBA0A1W2PPF3 345 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 CGB1A6NKQ9 187 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 FAM25EA8MYX2 175 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 SNAPC5O75971 98 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 IGLV1-40P01703 118 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 HLA-DRB1P01911 266 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 HLA-GP17693 338 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 RAB9AP51151 201 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 RPL8P62917 257 aaKnown RBP10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 FXYD3Q14802 87 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms