RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 STPG2Q8N412 459 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 C12orf45Q8N5I9 185 aaPredicted RBP5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 UXS1Q8NBZ7 420 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 OR1L8Q8NGR8 309 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 GRPEL2Q8TAA5 225 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 ABHD5Q8WTS1 349 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 CHPT1Q8WUD6 406 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 SRSF12Q8WXF0 261 aaKnown RBP5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 ARPC1AQ92747 370 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 SPIN2AQ99865 258 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 SPIN2BQ9BPZ2 258 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 FAM103A1Q9BTL3 118 aaKnown RBP5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 QTRT1Q9BXR0 403 aaKnown RBP5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 COMMD5Q9GZQ3 224 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 PARP11Q9NR21 331 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 NDUFA4L2Q9NRX3 87 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 ZNF580Q9UK33 172 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 FOXA2Q9Y261 457 aaPredicted RBP5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 ZNF257Q9Y2Q1 563 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 RNF114Q9Y508 228 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 OR51B2Q9Y5P1 312 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 WSB1Q9Y6I7 421 aa5.93□□□□□ -1.46
AC004540.1-206ENST00000448056 TRAV41A0A0B4J266 112 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 CGB1A6NKQ9 187 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 C15orf61A6NNL5 157 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 TEX22C9J3V5 150 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 ST8SIA3O43173 380 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 PITX3O75364 302 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 RBMXL2O75526 392 aaKnown RBP5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 IFNA21P01568 189 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 TRAPPC2P0DI81 140 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 TRAPPC2BP0DI82 140 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 SULT1A3P0DMM9 295 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 SULT1A4P0DMN0 295 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 PPIFP30405 207 aaKnown RBP5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 RPL27AP46776 148 aaKnown RBP5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 HSPE1P61604 102 aaKnown RBP5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 SMCO1Q147U7 214 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 KRTAP21-3Q3LHN1 58 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 AARDQ4LEZ3 155 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 AWAT1Q58HT5 328 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 C19orf54Q5BKX5 351 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 ASPHD1Q5U4P2 390 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 UNQ5815/PRO19632Q6UWF5 114 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 MINDY2Q8NBR6 621 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 LFNGQ8NES3 379 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 OR5B3Q8NH48 314 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 WIPF2Q8TF74 440 aaPredicted RBP5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 TMEM68Q96MH6 324 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 FYTTD1Q96QD9 318 aaKnown RBP5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 GON7Q9BXV9 100 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 COA4Q9NYJ1 87 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 CACNG5Q9UF02 275 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 CACFD1Q9UGQ2 172 aa5.92□□□□□ -1.46
AC004540.1-206ENST00000448056 C13orf42A0A1B0GVH6 325 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 C7orf66A4D0T2 115 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 PSMB11A5LHX3 300 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 HMX3A6NHT5 357 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 MPTX1A8MV57 137 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 PLXNB1O43157 2135 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 IFNA17P01571 189 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 APELAP0DMC3 54 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 SPCS3P61009 180 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 CFHR3Q02985 330 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 ECSCRQ19T08 205 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 C2orf68Q2NKX9 166 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 PDLIM3Q53GG5 364 aaPredicted RBP5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 C10orf99Q6UWK7 81 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 ZNF329Q86UD4 541 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 TTC9CQ8N5M4 171 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 KLHDC1Q8N7A1 406 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 OR5T1Q8NG75 326 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 OR5AU1Q8NGC0 362 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 OR10W1Q8NGF6 305 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 OR52E5Q8NH55 327 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 OR10C1Q96KK4 312 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 SRSF8Q9BRL6 282 aaKnown RBP5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 HINT2Q9BX68 163 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 ALG5Q9Y673 324 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 U3KQE9 123 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 TNCP24821 2201 aa5.91□□□□□ -1.46
AC004540.1-206ENST00000448056 COL6A5A8TX70 2615 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 IGLC7A0M8Q6 106 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 C5orf51A6NDU8 294 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 NPIPB5A8MRT5 1133 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 FAM25EA8MYX2 175 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 SSNA1O43805 119 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 SOX15O60248 233 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 IGHG4P01861 327 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 CRYGCP07315 174 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 OR13C7P0DN81 318 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 AREGP15514 252 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 PSMB6P28072 239 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 KRTAP10-3P60369 221 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 SLC35B1P78383 322 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 PRCDQ00LT1 54 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 WT1-ASQ06250 92 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 TNFRSF9Q07011 255 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 FOXE3Q13461 319 aa5.9□□□□□ -1.46
AC004540.1-206ENST00000448056 SPINK9Q5DT21 86 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms