RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 RFC3P40938 356 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 RBP2P50120 134 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 FXYD4P59646 89 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 S100A10P60903 97 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 SUPT4H1P63272 117 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 FAM3AP98173 230 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 PLGLB1Q02325 96 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 BTN1A1Q13410 526 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 SURF2Q15527 256 aaPredicted RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 PIGYQ3MUY2 71 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 PABPC1L2AQ5JQF8 200 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 TSPO2Q5TGU0 170 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 TMEM42Q69YG0 159 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 CTRB2Q6GPI1 263 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 ELP2Q6IA86 826 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 LCN12Q6JVE5 192 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 PRSS54Q6PEW0 395 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 APRG1Q8IVJ8 170 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 SGPP2Q8IWX5 399 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 OSR2Q8N2R0 312 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 STPG2Q8N412 459 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 PNKDQ8N490 385 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 ZADH2Q8N4Q0 377 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 DEFB123Q8N688 67 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 SPERTQ8NA61 448 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 OR2M7Q8NG81 312 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 OR1N2Q8NGR9 330 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 PSMF1Q92530 271 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 CPNE4Q96A23 557 aaPredicted RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 EEF1AKMT3Q96AZ1 226 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 MRPS24Q96EL2 167 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 PHYHIPLQ96FC7 376 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 PIK3IP1Q96FE7 263 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 ZNF2Q9BSG1 426 aaPredicted RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 FAAP24Q9BTP7 215 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 DDA1Q9BW61 102 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 MRPL37Q9BZE1 423 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 GAL3ST2Q9H3Q3 398 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 KCNJ16Q9NPI9 418 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 NECAP2Q9NVZ3 263 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 OR5AC2Q9NZP5 309 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 CLCF1Q9UBD9 225 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 ANXA10Q9UJ72 324 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 MCTS1Q9ULC4 181 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 NOSIPQ9Y314 301 aaKnown RBP2.99□□□□□ -1.93
VPS29-202ENST00000447578 F5P12259 2224 aa2.99□□□□□ -1.93
VPS29-202ENST00000447578 AGRNO00468 2067 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 TRBV6-7A0A0A0MS04 114 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 IGKV1D-13A0A0B4J2D9 117 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 A0A0G2JLM5 398 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 GEMIN2O14893 280 aaKnown RBP2.98□□□□□ -1.93
VPS29-202ENST00000447578 XRCC2O43543 280 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 HSBP1O75506 76 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 IFNA21P01568 189 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 MMP7P09237 267 aaPredicted RBP2.98□□□□□ -1.93
VPS29-202ENST00000447578 OR5AC1P0C628 307 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 P0C879 139 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 PET100P0DJ07 73 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 ZNF728P0DKX0 622 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 OR5H8P0DN80 308 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 IGKV1-13P0DP09 117 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 CD79AP11912 226 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 CCL2P13500 99 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 DTYMKP23919 212 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 LHX2P50458 406 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 PIGPP57054 158 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 LCN2P80188 198 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 DEFA5Q01523 94 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 SMCO1Q147U7 214 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 OR8B8Q15620 311 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 IAH1Q2TAA2 248 aaPredicted RBP2.98□□□□□ -1.93
VPS29-202ENST00000447578 SP6Q3SY56 376 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 Q3ZCU0 254 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 ABCA11PQ4W5N1 156 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 UTF1Q5T230 341 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 DUX4L9Q6RFH8 374 aaPredicted RBP2.98□□□□□ -1.93
VPS29-202ENST00000447578 ASCL4Q6XD76 172 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 SLC25A26Q70HW3 274 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 EIF4E3Q8N5X7 224 aaKnown RBP2.98□□□□□ -1.93
VPS29-202ENST00000447578 TMEM251Q8N6I4 163 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 LINC00612Q8N6U2 182 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 OR51F2Q8NH61 342 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 STOML3Q8TAV4 291 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 FNDC9Q8TBE3 224 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 C7orf33Q8WU49 177 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 APH1AQ96BI3 265 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 RPUSD4Q96CM3 377 aaKnown RBP2.98□□□□□ -1.93
VPS29-202ENST00000447578 NARS2Q96I59 477 aaKnown RBP2.98□□□□□ -1.93
VPS29-202ENST00000447578 OR10C1Q96KK4 312 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 AQP10Q96PS8 301 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 SULT4A1Q9BR01 284 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 TTTY12Q9BZ98 90 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 LINC00470Q9BZP3 86 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 ZNF442Q9H7R0 627 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 NAA60Q9H7X0 242 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 ZNF286AQ9HBT8 521 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 OR2S2Q9NQN1 319 aa2.98□□□□□ -1.93
VPS29-202ENST00000447578 CYTL1Q9NRR1 136 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms