RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CT45A3Q8NHU0 189 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 GNB1LQ9BYB4 327 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 TMEM167BQ9NRX6 74 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 IDI2-AS1Q9NZ38 188 aa15.68■□□□□ 0.1
SDCBP-204ENST00000447182 WDFY4Q6ZS81 3184 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 FCN1O00602 326 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 CGAP01215 116 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 IGFBP2P18065 325 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 TDGF1P3P51864 188 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 ADTRPQ96IZ2 230 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 SLC45A2Q9UMX9 530 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 IGHV3OR15-7A0A075B7D8 119 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 SAA2-SAA4A0A096LPE2 208 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 M0QZK8 103 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 TNFSF13O75888 250 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 LHBP01229 141 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 SAA2P0DJI9 122 aaPredicted RBP15.67■□□□□ 0.1
SDCBP-204ENST00000447182 PLA2G2CQ5R387 149 aa15.67■□□□□ 0.1
SDCBP-204ENST00000447182 ZNF71Q9NQZ8 489 aaPredicted RBP15.67■□□□□ 0.1
SDCBP-204ENST00000447182 HEATR1Q9H583 2144 aaKnown RBP15.66■□□□□ 0.1
SDCBP-204ENST00000447182 MSMPQ1L6U9 139 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 UTF1Q5T230 341 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 TOMM20LQ6UXN7 152 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 MIR17HGQ75NE6 70 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 OR5AU1Q8NGC0 362 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 ATG101Q9BSB4 218 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 IL19Q9UHD0 177 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 MUC3AQ02505 3323 aa15.66■□□□□ 0.1
SDCBP-204ENST00000447182 GPR179Q6PRD1 2367 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 HELTA6NFD8 242 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 IER3P46695 156 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 GNG4P50150 75 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 ZNF257Q9Y2Q1 563 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 KBTBD11-OT1A0A1B0GTJ5 212 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 SNURFLB1AK76 121 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 MT-ND6P03923 174 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 RPL19P84098 196 aaKnown RBP15.65■□□□□ 0.1
SDCBP-204ENST00000447182 BHLHA15Q7RTS1 189 aaPredicted RBP15.65■□□□□ 0.1
SDCBP-204ENST00000447182 BAGE3Q86Y29 109 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 BAGE2Q86Y30 109 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 SARAFQ96BY9 339 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 SLC35E1Q96K37 410 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 GUCD1Q96NT3 240 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 OR2V2Q96R30 315 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 HSPB9Q9BQS6 159 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 PRNDQ9UKY0 176 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 OR51B2Q9Y5P1 312 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 SLC25A15Q9Y619 301 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 DSCAML1Q8TD84 2053 aa15.65■□□□□ 0.1
SDCBP-204ENST00000447182 CD33P20138 364 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 PSG5Q15238 335 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 CENPWQ5EE01 88 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 LRP11Q86VZ4 500 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 PNKDQ8N490 385 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 LEAP2Q969E1 77 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 LOXL4Q96JB6 756 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 NABP2Q9BQ15 211 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 MIEN1Q9BRT3 115 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 LRFN3Q9BTN0 628 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 OSTCQ9NRP0 149 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 ATP5IP56385 69 aaPredicted RBP15.64■□□□□ 0.09
SDCBP-204ENST00000447182 CX3CL1P78423 397 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 OR5I1Q13606 314 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 COX19Q49B96 90 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 WDR73Q6P4I2 378 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 ZNF439Q8NDP4 499 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 C19orf24Q9BVV8 132 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 PARD6AQ9NPB6 346 aa15.64■□□□□ 0.09
SDCBP-204ENST00000447182 TECRQ9NZ01 308 aaKnown RBP15.64■□□□□ 0.09
SDCBP-204ENST00000447182 COL8A2P25067 703 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 MRPS11P82912 194 aaKnown RBP15.63■□□□□ 0.09
SDCBP-204ENST00000447182 TMEM183BQ1AE95 376 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 SPRNQ5BIV9 151 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 PQLC2Q6ZP29 291 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 MOGAT3Q86VF5 341 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 OR8I2Q8N0Y5 310 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 STARD4Q96DR4 205 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 PROCRQ9UNN8 238 aa15.63■□□□□ 0.09
SDCBP-204ENST00000447182 INTS1Q8N201 2190 aaKnown RBP15.63■□□□□ 0.09
SDCBP-204ENST00000447182 ACTL6BO94805 426 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 FRMD6-AS1P0C7T7 363 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 CRYBB3P26998 211 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 PRCDQ00LT1 54 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 IGFL2Q6UWQ7 119 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 ST6GALNAC3Q8NDV1 305 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 FAM222BQ8WU58 562 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 ZNF503Q96F45 646 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 PLEKHA3Q9HB20 300 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 AHRRA9YTQ3 701 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 J3QR06 171 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 SP9P0CG40 484 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 CDKN1AP38936 164 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 RTL8BQ17RB0 113 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 TDRG1Q3Y452 100 aa15.62■□□□□ 0.09
SDCBP-204ENST00000447182 ZNF705AQ6ZN79 300 aaPredicted RBP15.62■□□□□ 0.09
SDCBP-204ENST00000447182 F2Z2F3 143 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 ISLRO14498 428 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 OR5G3P0C626 314 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 COMPP49747 757 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-204ENST00000447182 OR10J3Q5JRS4 329 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms