RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 CROCCP3Q8IVE0 287 aa13.65□□□□□ -0.22
COL9A1-205ENST00000447041 YIPF6Q96EC8 236 aa13.65□□□□□ -0.22
COL9A1-205ENST00000447041 SRSF8Q9BRL6 282 aaKnown RBP13.65□□□□□ -0.22
COL9A1-205ENST00000447041 HYDINQ4G0P3 5121 aa13.65□□□□□ -0.22
COL9A1-205ENST00000447041 PGLYRP1O75594 196 aaPredicted RBP13.64□□□□□ -0.23
COL9A1-205ENST00000447041 FGF2P09038 288 aa13.64□□□□□ -0.23
COL9A1-205ENST00000447041 WT1-ASQ06250 92 aa13.64□□□□□ -0.23
COL9A1-205ENST00000447041 DHRS11Q6UWP2 260 aa13.64□□□□□ -0.23
COL9A1-205ENST00000447041 SLC16A13Q7RTY0 426 aa13.64□□□□□ -0.23
COL9A1-205ENST00000447041 GDPD1Q8N9F7 314 aa13.64□□□□□ -0.23
COL9A1-205ENST00000447041 BORCS5Q969J3 196 aa13.64□□□□□ -0.23
COL9A1-205ENST00000447041 EPPK1P58107 5090 aaKnown RBP13.63□□□□□ -0.23
COL9A1-205ENST00000447041 TEX50A0A1B0GTY4 177 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 OR13C7P0DN81 318 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 NAT1P18440 290 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 F2RP25116 425 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 PTBP1P26599 531 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL9A1-205ENST00000447041 ERVK-16P61578 105 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 OR52B4Q8NGK2 314 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 OR5H2Q8NGV7 314 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 FCAMRQ8WWV6 532 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 THYN1Q9P016 225 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 NSG2Q9Y328 171 aa13.63□□□□□ -0.23
COL9A1-205ENST00000447041 TGOLN2O43493 480 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 EIF4EP06730 217 aaKnown RBP13.62□□□□□ -0.23
COL9A1-205ENST00000447041 SERPINE2P07093 398 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 TRAPPC2P0DI81 140 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 TRAPPC2BP0DI82 140 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 G6PCP35575 357 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 LPAR6P43657 344 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 MFAP2P55001 183 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 TAS2R46P59540 309 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 ZNF585BQ52M93 769 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 THOC7Q6I9Y2 204 aaKnown RBP13.62□□□□□ -0.23
COL9A1-205ENST00000447041 PLET1Q6UQ28 207 aa13.62□□□□□ -0.23
COL9A1-205ENST00000447041 ZNF436Q9C0F3 470 aaPredicted RBP13.62□□□□□ -0.23
COL9A1-205ENST00000447041 IGHV3-21A0A0B4J1V1 117 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 OR2T8A6NH00 312 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 KRASP01116 189 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 C8orf88P0DMB2 117 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 PRSS3P35030 304 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 HRH1P35367 487 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 SLC25A24Q6NUK1 477 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 OR1L8Q8NGR8 309 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 VN1R17PQ8TDU5 208 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 TMEM190Q8WZ59 177 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 DGCR14Q96DF8 476 aaKnown RBP13.61□□□□□ -0.23
COL9A1-205ENST00000447041 HINT2Q9BX68 163 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 NDUFA4L2Q9NRX3 87 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 UFC1Q9Y3C8 167 aa13.61□□□□□ -0.23
COL9A1-205ENST00000447041 PLECQ15149 4684 aaKnown RBP13.6□□□□□ -0.23
COL9A1-205ENST00000447041 GPR31O00270 319 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 HLA-DMAP28067 261 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 HSD17B13Q7Z5P4 300 aaPredicted RBP13.6□□□□□ -0.23
COL9A1-205ENST00000447041 LYSMD2Q8IV50 215 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 CMTM1Q8IZ96 169 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 TSPAN14Q8NG11 270 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 LSM10Q969L4 123 aaKnown RBP13.6□□□□□ -0.23
COL9A1-205ENST00000447041 MARC2Q969Z3 335 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 SLC25A46Q96AG3 418 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 MRPL27Q9P0M9 148 aaKnown RBP13.6□□□□□ -0.23
COL9A1-205ENST00000447041 OR51B2Q9Y5P1 312 aa13.6□□□□□ -0.23
COL9A1-205ENST00000447041 F11RQ9Y624 299 aaKnown RBP13.6□□□□□ -0.23
COL9A1-205ENST00000447041 A0A087WXM4 84 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 DBX1A6NMT0 343 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 CYB5BO43169 146 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 ELLP55199 621 aaPredicted RBP13.59□□□□□ -0.23
COL9A1-205ENST00000447041 NCS1P62166 190 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 PHLDA2Q53GA4 152 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 RBPMS2Q6ZRY4 209 aaKnown RBP13.59□□□□□ -0.23
COL9A1-205ENST00000447041 OR1L6Q8NGR2 347 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 OR6F1Q8NGZ6 308 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 GPX8Q8TED1 209 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 GGTLC1Q9BX51 225 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 VCX3AQ9NNX9 186 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 COMMD3Q9UBI1 195 aa13.59□□□□□ -0.23
COL9A1-205ENST00000447041 TRAV25A0A0B4J276 109 aa13.58□□□□□ -0.24
COL9A1-205ENST00000447041 F8W735 103 aaPredicted RBP13.58□□□□□ -0.24
COL9A1-205ENST00000447041 ANKRD55Q3KP44 614 aa13.58□□□□□ -0.24
COL9A1-205ENST00000447041 SCARB1Q8WTV0 552 aa13.58□□□□□ -0.24
COL9A1-205ENST00000447041 BSCL2Q96G97 398 aaPredicted RBP13.58□□□□□ -0.24
COL9A1-205ENST00000447041 CHRDL1Q9BU40 450 aa13.58□□□□□ -0.24
COL9A1-205ENST00000447041 IGHV3OR16-8A0A075B7F1 116 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 LOC102724200A0A096LPH7 203 aaPredicted RBP13.57□□□□□ -0.24
COL9A1-205ENST00000447041 K7EIM0 57 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 SNAPC5O75971 98 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 SNX29P2Q8IUI4 249 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 UBAC2Q8NBM4 344 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
COL9A1-205ENST00000447041 C21orf62Q9NYP8 219 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 UBQLN2Q9UHD9 624 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 PRNDQ9UKY0 176 aa13.57□□□□□ -0.24
COL9A1-205ENST00000447041 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
COL9A1-205ENST00000447041 ADMP35318 185 aa13.56□□□□□ -0.24
COL9A1-205ENST00000447041 VBP1P61758 197 aa13.56□□□□□ -0.24
COL9A1-205ENST00000447041 TSPAN5P62079 268 aa13.56□□□□□ -0.24
COL9A1-205ENST00000447041 TBC1D26Q86UD7 250 aa13.56□□□□□ -0.24
COL9A1-205ENST00000447041 CADM3Q8N126 398 aa13.56□□□□□ -0.24
COL9A1-205ENST00000447041 IL17DQ8TAD2 202 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms