RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 HIPK2Q9H2X6 1198 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 C11orf1Q9H5F2 150 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 PLEKHA3Q9HB20 300 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 VPREB3Q9UKI3 123 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 HLA-DRB1P01911 266 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 VDAC2P45880 294 aaPredicted RBP7.56□□□□□ -1.2
NPHP1-207ENST00000445609 P2RY1P47900 373 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 EIF2B2P49770 351 aaKnown RBP7.56□□□□□ -1.2
NPHP1-207ENST00000445609 PAX9P55771 341 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 RPL23AP62750 156 aaKnown RBP7.56□□□□□ -1.2
NPHP1-207ENST00000445609 SSBP2P81877 361 aaPredicted RBP7.56□□□□□ -1.2
NPHP1-207ENST00000445609 FXYD3Q14802 87 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 INO80EQ8NBZ0 244 aaPredicted RBP7.56□□□□□ -1.2
NPHP1-207ENST00000445609 GRPEL2Q8TAA5 225 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 SRSF12Q8WXF0 261 aaKnown RBP7.56□□□□□ -1.2
NPHP1-207ENST00000445609 HEYLQ9NQ87 328 aaPredicted RBP7.56□□□□□ -1.2
NPHP1-207ENST00000445609 TNFRSF19Q9NS68 423 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 PSENENQ9NZ42 101 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 TNFSF18Q9UNG2 199 aa7.56□□□□□ -1.2
NPHP1-207ENST00000445609 A0A1W2PN81 502 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 CGB1A6NKQ9 187 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 ARPC5O15511 151 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 AMY1AP04745 511 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 CHRNA7P36544 502 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 NUP62P37198 522 aaPredicted RBP7.55□□□□□ -1.2
NPHP1-207ENST00000445609 CAV2P51636 162 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 NKX2-5P52952 324 aaPredicted RBP7.55□□□□□ -1.2
NPHP1-207ENST00000445609 NAV3Q8IVL0 2385 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 IGHV7-81A0A0B4J1V7 117 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 A0A1B0GW64 132 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 MSGN1A6NI15 193 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 INS-IGF2F8WCM5 200 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 KCNAB3O43448 404 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 TSC22D2O75157 780 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 SPANXN5Q5MJ07 72 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 MRPL41Q8IXM3 137 aaKnown RBP7.55□□□□□ -1.2
NPHP1-207ENST00000445609 OR2C3Q8N628 320 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 TMEM86BQ8N661 226 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 OR10W1Q8NGF6 305 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 MFFQ9GZY8 342 aa7.55□□□□□ -1.2
NPHP1-207ENST00000445609 LYRM2Q9NU23 88 aaPredicted RBP7.55□□□□□ -1.2
NPHP1-207ENST00000445609 INAFM1C9JVW0 142 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 H3BP45 60 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 RPP30P78346 268 aaKnown RBP7.54□□□□□ -1.2
NPHP1-207ENST00000445609 ERHP84090 104 aaKnown RBP7.54□□□□□ -1.2
NPHP1-207ENST00000445609 ACOT7LQ6ZUV0 252 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 HSD17B13Q7Z5P4 300 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-207ENST00000445609 ARPC1AQ92747 370 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 HSPB9Q9BQS6 159 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 SRSF8Q9BRL6 282 aaKnown RBP7.54□□□□□ -1.2
NPHP1-207ENST00000445609 U3KQ87 197 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 HIVEP1P15822 2718 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 FAM24AA6NFZ4 105 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 SH2D7A6NKC9 451 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-207ENST00000445609 TEX22C9J3V5 150 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 IFNA10P01566 189 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 OR13C7P0DN81 318 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 RPL12P30050 165 aaKnown RBP7.54□□□□□ -1.2
NPHP1-207ENST00000445609 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 AQP10Q96PS8 301 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 SLC25A31Q9H0C2 315 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 STRAPQ9Y3F4 350 aaKnown RBP7.54□□□□□ -1.2
NPHP1-207ENST00000445609 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
NPHP1-207ENST00000445609 SONP18583 2426 aaKnown RBP7.53□□□□□ -1.2
NPHP1-207ENST00000445609 IGLC7A0M8Q6 106 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 RNF222A6NCQ9 220 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 HKR1P10072 659 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 SNCAP37840 140 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 HTR2BP41595 481 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 AP2S1P53680 142 aaPredicted RBP7.53□□□□□ -1.2
NPHP1-207ENST00000445609 BLCAPP62952 87 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 NDPQ00604 133 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 OR2F1Q13607 317 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 LGALSLQ3ZCW2 172 aaPredicted RBP7.53□□□□□ -1.2
NPHP1-207ENST00000445609 TMEM252Q8N6L7 170 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 ABHD5Q8WTS1 349 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
NPHP1-207ENST00000445609 ZC4H2Q9NQZ6 224 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 MXRA5Q9NR99 2828 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 CXCL2P19875 107 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 ATP5IP56385 69 aaPredicted RBP7.53□□□□□ -1.2
NPHP1-207ENST00000445609 C9orf152Q5JTZ5 239 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 C9orf62Q8N4C0 152 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 SLC24A4Q8NFF2 622 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 ZNF418Q8TF45 676 aaPredicted RBP7.53□□□□□ -1.2
NPHP1-207ENST00000445609 DUX5Q96PT3 197 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 OR4C12Q96R67 309 aa7.53□□□□□ -1.2
NPHP1-207ENST00000445609 PAIP2BQ9ULR5 123 aaKnown RBP7.53□□□□□ -1.2
NPHP1-207ENST00000445609 A0A0D9SG52 128 aa7.52□□□□□ -1.21
NPHP1-207ENST00000445609 IGSF23A1L1A6 192 aa7.52□□□□□ -1.21
NPHP1-207ENST00000445609 DNAJC9-AS1A6NH13 148 aa7.52□□□□□ -1.21
NPHP1-207ENST00000445609 APELAP0DMC3 54 aa7.52□□□□□ -1.21
NPHP1-207ENST00000445609 EGR2P11161 476 aaPredicted RBP7.52□□□□□ -1.21
NPHP1-207ENST00000445609 AREGP15514 252 aa7.52□□□□□ -1.21
NPHP1-207ENST00000445609 EWSR1Q01844 656 aaKnown RBP eCLIP7.52□□□□□ -1.21
NPHP1-207ENST00000445609 ZNF345Q14585 488 aa7.52□□□□□ -1.21
NPHP1-207ENST00000445609 LAMTOR1Q6IAA8 161 aa7.52□□□□□ -1.21
NPHP1-207ENST00000445609 STX12Q86Y82 276 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms