RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 KIAA2026Q5HYC2 2103 aa3.76□□□□□ -1.81
PTPN4-206ENST00000441089 DNAH10Q8IVF4 4471 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 IGHV1-69DA0A0B4J2H0 117 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 A0A0U1RQK1 487 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 CENPVL3A0A0U1RRI6 287 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 hCG_1809904A0A1W2PP81 198 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PPE2 198 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PPI3 338 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PR64 198 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PRV1 198 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 G3V3Q6 166 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 H0YJW9 148 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 SMLR1H3BR10 107 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 GOSR2O14653 212 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TOR1AO14656 332 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 SSNA1O43805 119 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 SLC22A5O76082 557 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 S1PR2O95136 353 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 CDS2O95674 445 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 IGKV1-5P01602 117 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 IGHV1-69P01742 117 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 ARG1P05089 322 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 P0C879 139 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TRAPPC2P0DI81 140 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TRAPPC2BP0DI82 140 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 CD28P10747 220 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 HLA-GP17693 338 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 LPAR6P43657 344 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 H2BFSP57053 126 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 IZUMO4Q1ZYL8 232 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TPTE2P1Q5T6R2 138 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TMEM268Q5VZI3 342 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 GGNBP1Q5YKI7 109 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 FAM71F2Q6NXP2 309 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF66Q6ZN08 573 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 LYZL2Q7Z4W2 148 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 FAM219AQ8IW50 185 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 CMTM1Q8IZ96 169 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 SLC35G3Q8N808 338 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 LRTM2Q8N967 370 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 OR13D1Q8NGV5 346 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TCTEX1D2Q8WW35 142 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TMEM56Q96MV1 263 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 FYTTD1Q96QD9 318 aaKnown RBP3.75□□□□□ -1.81
PTPN4-206ENST00000441089 HSD17B10Q99714 261 aaKnown RBP3.75□□□□□ -1.81
PTPN4-206ENST00000441089 CITED2Q99967 270 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TMEM222Q9H0R3 208 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 MED28Q9H204 178 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 HEXA-AS1Q9H8Q6 139 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 GPN1Q9HCN4 374 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-206ENST00000441089 MGAT4CQ9UBM8 478 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 SIGLEC9Q9Y336 463 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 TMEM56-RWDD3S4R434 201 aa3.75□□□□□ -1.81
PTPN4-206ENST00000441089 KMT2AQ03164 3969 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 IGHV3-72A0A0B4J1Y9 119 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 IGHV1-3A0A0C4DH29 117 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 SRRM4A7MD48 611 aaKnown RBP3.74□□□□□ -1.81
PTPN4-206ENST00000441089 NPFFO15130 113 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 FCGR3BO75015 233 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 IGKV1-16P04430 117 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 AMY1AP04745 511 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 HOXB5P09067 269 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 RPA2P15927 270 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 HTR1DP28221 377 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 SAA4P35542 130 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 THBS3P49746 956 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 UBE2E1P51965 193 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 PRRX1P54821 245 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 ELLP55199 621 aaPredicted RBP3.74□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF816Q0VGE8 651 aaPredicted RBP3.74□□□□□ -1.81
PTPN4-206ENST00000441089 CATR1Q13166 79 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 IL15RAQ13261 267 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 Q5BKY6 102 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 NMSQ5H8A3 153 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 MINOS1Q5TGZ0 78 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 TGIF2LXQ8IUE1 241 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 SPAG16Q8N0X2 631 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 LGI3Q8N145 548 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 UXS1Q8NBZ7 420 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 OR5M8Q8NGP6 311 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 OR10X1Q8NGY0 326 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 COQ8AQ8NI60 647 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 IL22RA2Q969J5 263 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 GPR146Q96CH1 333 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 SEC22AQ96IW7 307 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 RITA1Q96K30 269 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 OR10C1Q96KK4 312 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 S1PR3Q99500 378 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 PHB2Q99623 299 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 NPFFR1Q9GZQ6 430 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 RANGRFQ9HD47 186 aaPredicted RBP3.74□□□□□ -1.81
PTPN4-206ENST00000441089 SLC35D1Q9NTN3 355 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 DPM3Q9P2X0 92 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 KCNIP3Q9Y2W7 256 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 HILPDAQ9Y5L2 63 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 MINOS1-NBL1R4GNA1 71 aa3.74□□□□□ -1.81
PTPN4-206ENST00000441089 TRAV14DV4A0A0A6YYC5 116 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 TRAV3A0A0B4J244 114 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 FAM90A9PA6NNJ1 464 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms