RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZNF45Q02386 682 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 KLF5Q13887 457 aaPredicted RBP8.04□□□□□ -1.12
MCF2L-216ENST00000439475 SLC25A24Q6NUK1 477 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 OR9G4Q8NGQ1 327 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 OR5B3Q8NH48 314 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 LSM10Q969L4 123 aaKnown RBP8.04□□□□□ -1.12
MCF2L-216ENST00000439475 PRRT1Q99946 306 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 HINT2Q9BX68 163 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 NXF2Q9GZY0 626 aaKnown RBP8.04□□□□□ -1.12
MCF2L-216ENST00000439475 SCP2D1Q9UJQ7 156 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 PKD1L1Q8TDX9 2849 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 TRBV7-1A0A0A6YYK4 115 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 C3orf85A0A1B0GTC6 90 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 H0Y980 276 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 ZNF701M0R085 212 aaPredicted RBP8.03□□□□□ -1.12
MCF2L-216ENST00000439475 GSTZ1O43708 216 aaPredicted RBP8.03□□□□□ -1.12
MCF2L-216ENST00000439475 NDUFB8O95169 186 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 REG1AP05451 166 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 OR13C7P0DN81 318 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 MYOD1P15172 320 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 FAUP35544 74 aaKnown RBP8.03□□□□□ -1.12
MCF2L-216ENST00000439475 MECP2P51608 486 aaKnown RBP8.03□□□□□ -1.12
MCF2L-216ENST00000439475 PPP5CP53041 499 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 SYNJ2BPP57105 145 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 DEFA5Q01523 94 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 CD69Q07108 199 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 SURF2Q15527 256 aaPredicted RBP8.03□□□□□ -1.12
MCF2L-216ENST00000439475 KLK9Q2XQG4 91 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 TRIM16LQ309B1 348 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 MARCH1Q8TCQ1 289 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 PRR25Q96S07 402 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 PDCD10Q9BUL8 212 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 NDUFA4L2Q9NRX3 87 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 KLK9Q9UKQ9 250 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 NSG2Q9Y328 171 aa8.03□□□□□ -1.12
MCF2L-216ENST00000439475 SORL1Q92673 2214 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 IGLV11-55A0A075B6I3 123 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 TEX13DA0A0J9YY54 714 aaPredicted RBP8.02□□□□□ -1.13
MCF2L-216ENST00000439475 IGLC7A0M8Q6 106 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 ANKRD20A5PA0PJZ0 165 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 CGB1A6NKQ9 187 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 C15orf61A6NNL5 157 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 PI3P19957 117 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 AKR1C2P52895 323 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 AP3S2P59780 193 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 ERHP84090 104 aaKnown RBP8.02□□□□□ -1.13
MCF2L-216ENST00000439475 FAM106AQ4KMX7 169 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 CLEC19AQ6UXS0 136 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 OR4D10Q8NGI6 311 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 RNASE11Q8TAA1 199 aaKnown RBP8.02□□□□□ -1.13
MCF2L-216ENST00000439475 MRGPRFQ96AM1 343 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 RRNAD1Q96FB5 475 aaKnown RBP8.02□□□□□ -1.13
MCF2L-216ENST00000439475 SEC22AQ96IW7 307 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 THAP7Q9BT49 309 aaPredicted RBP8.02□□□□□ -1.13
MCF2L-216ENST00000439475 SIGLEC8Q9NYZ4 499 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 NDUFA13Q9P0J0 144 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 KCNIP3Q9Y2W7 256 aa8.02□□□□□ -1.13
MCF2L-216ENST00000439475 A0A1B0GW64 132 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 TRBV12-3P01733 135 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 GP9P14770 177 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 SPNP16150 400 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 ARL3P36405 182 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 HSPE1P61604 102 aaKnown RBP8.01□□□□□ -1.13
MCF2L-216ENST00000439475 DHODHQ02127 395 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 PYDC2Q56P42 97 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 GPHB5Q86YW7 130 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 GDPD1Q8N9F7 314 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 OR10W1Q8NGF6 305 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 OR4C16Q8NGL9 310 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 OR13C8Q8NGS7 320 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 VN1R17PQ8TDU5 208 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 B9D2Q9BPU9 175 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 SOSTQ9BQB4 213 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 MCUBQ9NWR8 336 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 GAR1Q9NY12 217 aaKnown RBP8.01□□□□□ -1.13
MCF2L-216ENST00000439475 GPR132Q9UNW8 380 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 SMAD5-AS1Q9Y6J3 95 aa8.01□□□□□ -1.13
MCF2L-216ENST00000439475 PIGBOS1A0A0B4J2F0 54 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 BMPR1BO00238 502 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 OR2C1O95371 312 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 IGKV1-39P01597 117 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 IGLV1-51P01701 117 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 IGHV3-23P01764 117 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 IGKV1D-39P04432 117 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 CLEC3BP05452 202 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 UCP1P25874 307 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 SP6Q3SY56 376 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 SPANXN2Q5MJ10 180 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 FAAP20Q6NZ36 180 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 PLET1Q6UQ28 207 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 SGPP2Q8IWX5 399 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 TOMM5Q8N4H5 51 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 OR51S1Q8NGJ8 323 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 OR2K2Q8NGT1 345 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 DYNLRB2Q8TF09 96 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 DEDD2Q8WXF8 326 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 TP53RKQ96S44 253 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 NAA60Q9H7X0 242 aa8□□□□□ -1.13
MCF2L-216ENST00000439475 PLEKHA3Q9HB20 300 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms