RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RNF212BA8MTL3 300 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 HAND1O96004 215 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 P0C879 139 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 SELENOVP59797 346 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 LINC00173Q6ZV60 143 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 OR13A1Q8NGR1 328 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 C1orf159Q96HA4 380 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 SFXN3Q9BWM7 321 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 BET1LQ9NYM9 111 aa11.09□□□□□ -0.63
ACTN1-204ENST00000438964 hDV102S1A0JD36 115 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 FOXA3P55318 350 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-204ENST00000438964 Q0VG73 95 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 RIPPLY2Q5TAB7 128 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 AGBL5Q8NDL9 886 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 OR4A16Q8NH70 328 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 ZNF596Q8TC21 504 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 SLC35D1Q9NTN3 355 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 TECRQ9NZ01 308 aaKnown RBP11.08□□□□□ -0.64
ACTN1-204ENST00000438964 WASHC3Q9Y3C0 194 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 CEP192Q8TEP8 1941 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 DMXL1Q9Y485 3027 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 J3QT63 122 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 M0R2Z0 102 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 HSBP1O75506 76 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 CER1O95813 267 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 USF1P22415 310 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-204ENST00000438964 PRRX1P54821 245 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 ZNF355PQ9NSJ1 428 aa11.08□□□□□ -0.64
ACTN1-204ENST00000438964 ESDP10768 282 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 CA7P43166 264 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 FOXF2Q12947 444 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 LYSMD4Q5XG99 296 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 ARL2-SNX15V9GYD0 113 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 POLEQ07864 2286 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 TRBV6-6A0A0A6YYG2 114 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 IGHV2OR16-5A0A0B4J2B6 119 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 APCSP02743 223 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 MDP1Q86V88 176 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
ACTN1-204ENST00000438964 GAL3ST2Q9H3Q3 398 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 OBP2BQ9NPH6 170 aa11.07□□□□□ -0.64
ACTN1-204ENST00000438964 M0R1X1 148 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 PROP1O75360 226 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 TCTEX1D1Q8N7M0 179 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 COQ2Q96H96 371 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 MAGEA5P43359 124 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 MFAP2P55001 183 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 CLDN18P56856 261 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 FOXE3Q13461 319 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 VWC2Q2TAL6 325 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 IBA57Q5T440 356 aaKnown RBP11.06□□□□□ -0.64
ACTN1-204ENST00000438964 TRAT1Q6PIZ9 186 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 SMRP1Q8NCR6 262 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 OR8B2Q96RD0 313 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 SH2D2AQ9NP31 389 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 TNRC6AQ8NDV7 1962 aaKnown RBP11.06□□□□□ -0.64
ACTN1-204ENST00000438964 TRAV5A0A0B4J249 113 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 LY6G6EA0A0G2JKS1 128 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 CORTO00230 105 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 RAB29O14966 203 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 IGFBP4P22692 258 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 GDF5OSQ5U4N7 250 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 C18orf32Q8TCD1 76 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 U3KQA8 63 aa11.06□□□□□ -0.64
ACTN1-204ENST00000438964 OR5B21A6NL26 309 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 NUDT3O95989 172 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 TNFSF4P23510 183 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 EPHA8P29322 1005 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-204ENST00000438964 RIPPLY3P57055 190 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 CX3CL1P78423 397 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 OR2Y1Q8NGV0 311 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 OR52E5Q8NH55 327 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 MBNL3Q9NUK0 354 aaKnown RBP11.05□□□□□ -0.64
ACTN1-204ENST00000438964 GNG12Q9UBI6 72 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 GGTLC3B5MD39 225 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 NPIPB11E5RHQ5 1161 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 OPRK1P41145 380 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 CDKN1BP46527 198 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 ZNF138P52744 262 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 MORN5Q5VZ52 161 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 OR4A47Q6IF82 309 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 ADGRG4Q8IZF6 3080 aa11.05□□□□□ -0.64
ACTN1-204ENST00000438964 MUC21A0A0G2JKD1 596 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 MUC21A0A140T8X8 626 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 GFRA3O60609 400 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 TIGITQ495A1 244 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 DCAF12Q5T6F0 453 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 AMMECR1LQ6DCA0 310 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 MRPL52Q86TS9 123 aaKnown RBP11.04□□□□□ -0.64
ACTN1-204ENST00000438964 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 KCNE4Q8WWG9 221 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 RTL8AQ9BWD3 113 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 LOXL2Q9Y4K0 774 aa11.04□□□□□ -0.64
ACTN1-204ENST00000438964 TMEM30CPA0ZSE6 113 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms