RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MUC15Q8N387 334 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 RIBC1Q8N443 379 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 CMTM2Q8TAZ6 248 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 ACTL9Q8TC94 416 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 CD200R1Q8TD46 325 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 RAD51AP1Q96B01 352 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 LRRC45Q96CN5 670 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 TLCD1Q96CP7 247 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 PYURFQ96I23 114 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 CIB1Q99828 191 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 VSIRQ9H7M9 311 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 METTL8Q9H825 291 aaKnown RBP1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 CBLN4Q9NTU7 201 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 MED29Q9NX70 200 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF586Q9NXT0 402 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 MED11Q9P086 117 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 GUCA1BQ9UMX6 200 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 SLC22A14Q9Y267 594 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 PKHD1P08F94 4074 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 HMCN2Q8NDA2 5059 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 DNAH6Q9C0G6 4158 aa1.29□□□□□ -2.2
HMGB1P31-201ENST00000437242 APOBP04114 4563 aaKnown RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 IGKV1OR2-108A0A075B7D4 117 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 IGHV3-21A0A0B4J1V1 117 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 IGHV1-18A0A0C4DH31 117 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 GOLGA8QA0A0J9YX86 632 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 A0A1W2PNN7 141 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 GOLGA8RI6L899 631 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 APOC4-APOC2K7ER74 178 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 K7ERS5 55 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 GYG2O15488 501 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 ENTPD6O75354 484 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 SC5DO75845 299 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DHRS3O75911 302 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 PIAS1O75925 651 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 IGHV3-53P01767 116 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 HLA-AP01891 365 aaKnown RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 APOC2P02655 101 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 S100A9P06702 114 aaKnown RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 RPS3P23396 243 aaKnown RBP eCLIP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 PRTN3P24158 256 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 IL12BP29460 328 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 RANBP1P43487 201 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 XKP51811 444 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 FOXA1P55317 472 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 RWDD2BP57060 319 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 KLF3P57682 345 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 VSNL1P62760 191 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 FMODQ06828 376 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 BNIP2Q12982 314 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 PDK2Q15119 407 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 UAP1Q16222 522 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 C6orf183Q5T699 404 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF660Q6AZW8 331 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 HCP5Q6MZN7 132 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 OLIG3Q7RTU3 272 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 FAM19A1Q7Z5A9 133 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 LINC00596Q86U02 117 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 SPICQ8N5J4 248 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 UBL4BQ8N7F7 174 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DRAXINQ8NBI3 349 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 MORN4Q8NDC4 146 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DEFB108BQ8NET1 73 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 OR2M3Q8NG83 312 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 OR52E4Q8NGH9 312 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 OR8S1Q8NH09 359 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 OR10D3Q8NH80 312 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 EEF1AKMT1Q8WVE0 214 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 KCTD4Q8WVF5 259 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF75CPQ92670 426 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 TMBIM1Q969X1 311 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 TMIGD2Q96BF3 282 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 LRRC39Q96DD0 335 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DHRS9Q9BPW9 319 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 COPS4Q9BT78 406 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 RAB1BQ9H0U4 201 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DSN1Q9H410 356 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 PLEKHA1Q9HB21 404 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 RHOFQ9HBH0 211 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 TMBIM4Q9HC24 238 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DIABLOQ9NR28 239 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 ZNF229Q9UJW7 825 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DKKL1Q9UK85 242 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 MMACHCQ9Y4U1 282 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 STAB2Q8WWQ8 2551 aa1.28□□□□□ -2.2
HMGB1P31-201ENST00000437242 DOCK11Q5JSL3 2073 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 TRAPPC2LH3BP13 241 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 H3BQF6 201 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 GOLGA8MH3BSY2 632 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 PSMD12O00232 456 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 FFAR1O14842 300 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 CPSF4O95639 269 aaKnown RBP1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 FAM107AO95990 144 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 MSMBP08118 114 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 OR4A8P0C604 315 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 SCGB1C2P0DMR2 95 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 ERVS71-1P61550 626 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 TSPAN5P62079 268 aa1.27□□□□□ -2.21
HMGB1P31-201ENST00000437242 RELAQ04206 551 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms