RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 FGFBP3Q8TAT2 258 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 SPSB4Q96A44 273 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 TICRRQ7Z2Z1 1910 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 CCDC88CQ9P219 2028 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 TRBV6-7A0A0A0MS04 114 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV2-26A0A0B4J1V2 119 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 TRAV41A0A0B4J266 112 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 C3orf36Q3SXR2 165 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 ZNF841Q6ZN19 808 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 STPG2Q8N412 459 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 LINC01587Q99440 93 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 ELF5Q9UKW6 265 aaPredicted RBP13.04□□□□□ -0.32
NEDD4-202ENST00000435532 MIEN1Q9BRT3 115 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
NEDD4-202ENST00000435532 RRHO14718 337 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 DTX1Q86Y01 620 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 SRSF12Q8WXF0 261 aaKnown RBP13.04□□□□□ -0.32
NEDD4-202ENST00000435532 NABP1Q96AH0 204 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 ARL14EPLP0DKL9 152 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 ZNF474Q6S9Z5 364 aaPredicted RBP13.04□□□□□ -0.32
NEDD4-202ENST00000435532 SCGB1D4Q6XE38 83 aa13.04□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV3OR16-13A0A075B7E8 117 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV3-74A0A0B4J1X5 117 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV3-66A0A0C4DH42 116 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 ELOBQ15370 118 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 PVRIGQ6DKI7 326 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 TMEM167AQ8TBQ9 72 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 RNF5Q99942 180 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 H3BQ15 152 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 IER3P46695 156 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 AWAT1Q58HT5 328 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 AQP10Q96PS8 301 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 NINQ8N4C6 2090 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 GCGP01275 180 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 CD33P20138 364 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 RHOGP84095 191 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 CLRN3Q8NCR9 226 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 NDUFB4O95168 129 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 CKS2P33552 79 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 TPTE2P1Q5T6R2 138 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
NEDD4-202ENST00000435532 RGP1Q92546 391 aaPredicted RBP13.03□□□□□ -0.32
NEDD4-202ENST00000435532 IL6RP08887 468 aaPredicted RBP13.02□□□□□ -0.32
NEDD4-202ENST00000435532 DHRS11Q6UWP2 260 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 S4R3C0 116 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 VWA8A3KMH1 1905 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV3-49A0A0A0MS15 119 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.32
NEDD4-202ENST00000435532 TMEM262E9PQX1 116 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 RBFOX2O43251 390 aaKnown RBP eCLIP13.02□□□□□ -0.32
NEDD4-202ENST00000435532 CD5P06127 495 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 RNF224P0DH78 156 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 UCP1P25874 307 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 ASIPP42127 132 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 ZNF257Q9Y2Q1 563 aa13.02□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV3-48P01763 117 aa13.02□□□□□ -0.33
NEDD4-202ENST00000435532 HLA-DRB1P01911 266 aa13.02□□□□□ -0.33
NEDD4-202ENST00000435532 IGHV1-8P0DP01 117 aa13.02□□□□□ -0.33
NEDD4-202ENST00000435532 HNRNPA3P51991 378 aaKnown RBP13.02□□□□□ -0.33
NEDD4-202ENST00000435532 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
NEDD4-202ENST00000435532 FOXG1P55316 489 aaPredicted RBP13.02□□□□□ -0.33
NEDD4-202ENST00000435532 SIGIRRQ6IA17 410 aa13.02□□□□□ -0.33
NEDD4-202ENST00000435532 C9orf62Q8N4C0 152 aa13.02□□□□□ -0.33
NEDD4-202ENST00000435532 HIST1H2BAQ96A08 127 aa13.02□□□□□ -0.33
NEDD4-202ENST00000435532 GOLT1AQ6ZVE7 132 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 ANK1P16157 1881 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 RNF223E7ERA6 249 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 MFAP2P55001 183 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 FBLN5Q9UBX5 448 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 CBY3A6NI87 242 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 MEF2BQ02080 365 aaPredicted RBP13.01□□□□□ -0.33
NEDD4-202ENST00000435532 TMEM200BQ69YZ2 307 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 Q96MF0 132 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 PSMG3Q9BT73 122 aaPredicted RBP13.01□□□□□ -0.33
NEDD4-202ENST00000435532 TRAV24A0A0B4J272 114 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 TMEM218A2RU14 115 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 DPRXA6NFQ7 191 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 HEPN1Q6WQI6 88 aa13.01□□□□□ -0.33
NEDD4-202ENST00000435532 PIKFYVEQ9Y2I7 2098 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 IGF2-ASQ6U949 168 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 SAP30O75446 220 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 NIT2Q9NQR4 276 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 FRMPD3Q5JV73 1810 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 FAM90A9PA6NNJ1 464 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 MT-ND6P03923 174 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 ICAM4Q14773 271 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 RPUSD1Q9UJJ7 312 aaKnown RBP13□□□□□ -0.33
NEDD4-202ENST00000435532 F12P00748 615 aaPredicted RBP13□□□□□ -0.33
NEDD4-202ENST00000435532 TMEM183BQ1AE95 376 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 PAPPA-AS1Q5QFB9 102 aa13□□□□□ -0.33
NEDD4-202ENST00000435532 FAM74A4Q5TZK3 123 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms