RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 H3BP45 60 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 NBR2O15453 112 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 NDUFA3O95167 84 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 LY86O95711 162 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 FAM106CPP0CH98 169 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 TMEM11P17152 192 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 CD24P25063 80 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 HOXA1P49639 335 aaPredicted RBP9□□□□□ -0.97
LINC00539-203ENST00000434601 BPIFB3P59826 476 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 HILS1P60008 231 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 HSPE1P61604 102 aaKnown RBP9□□□□□ -0.97
LINC00539-203ENST00000434601 PRCDQ00LT1 54 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 EBI3Q14213 229 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 MMDQ15546 238 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 FBLN7Q53RD9 439 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 THNSL2Q86YJ6 484 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 MMD2Q8IY49 270 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 Q8N6K4 173 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 TMEM252Q8N6L7 170 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 NPBQ8NG41 125 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 OR5B3Q8NH48 314 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 ARPC5LQ9BPX5 153 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 ZNF430Q9H8G1 570 aaPredicted RBP9□□□□□ -0.97
LINC00539-203ENST00000434601 PLEKHA3Q9HB20 300 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 PSENENQ9NZ42 101 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 KIAA1456Q9P272 454 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 SIGLEC9Q9Y336 463 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 PKD1L1Q8TDX9 2849 aa9□□□□□ -0.97
LINC00539-203ENST00000434601 TET2Q6N021 2002 aaPredicted RBP8.99□□□□□ -0.97
LINC00539-203ENST00000434601 TMEM89A2RUT3 159 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 RRHO14718 337 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 FSHBP01225 129 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 FBP1P09467 338 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 MYOD1P15172 320 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 DYNLT3P51808 116 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 BAXQ07812 192 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 TMEM267Q0VDI3 215 aaPredicted RBP8.99□□□□□ -0.97
LINC00539-203ENST00000434601 HNF4GQ14541 408 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 PLGLAQ15195 96 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 PRSS8Q16651 343 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 STX12Q86Y82 276 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 OR1L8Q8NGR8 309 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 GON7Q9BXV9 100 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 COMMD5Q9GZQ3 224 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 MEGF9Q9H1U4 602 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 FBXL15Q9H469 300 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 SLA2Q9H6Q3 261 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 ENY2Q9NPA8 101 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 FBXL17Q9UF56 701 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 FAM96BQ9Y3D0 163 aa8.99□□□□□ -0.97
LINC00539-203ENST00000434601 TEX50A0A1B0GTY4 177 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 MAS1LP35410 378 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 VDAC2P45880 294 aaPredicted RBP8.98□□□□□ -0.97
LINC00539-203ENST00000434601 F2RL1P55085 397 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 MRGPRG-AS1Q2M3A8 158 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 LRRC75BQ2VPJ9 315 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 SPANXN5Q5MJ07 72 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 C10orf55Q5SWW7 151 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 SLC51BQ86UW2 128 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 PPP1R27Q86WC6 154 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 OR8H1Q8NGG4 311 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 NANPQ8TBE9 248 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 OR4C12Q96R67 309 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 HINT2Q9BX68 163 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 HIPK2Q9H2X6 1198 aa8.98□□□□□ -0.97
LINC00539-203ENST00000434601 HEYLQ9NQ87 328 aaPredicted RBP8.98□□□□□ -0.97
LINC00539-203ENST00000434601 A0A1W2PN81 502 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 TAAR5O14804 337 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 CST7O76096 145 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 ACTL6BO94805 426 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 SCAF4O95104 1147 aaKnown RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 OPN1MWP04001 364 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 METTL15P1P0C7V9 234 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 OPN1MW2P0DN77 364 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 OPN1MW3P0DN78 364 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 CHRNA7P36544 502 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 RPL27AP46776 148 aaKnown RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 SULT1A1P50225 295 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 UBA52P62987 128 aaKnown RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 RPP30P78346 268 aaKnown RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 IFITM2Q01629 132 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 NHLH2Q02577 135 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 PJVKQ0ZLH3 352 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 TNXAQ16473 311 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 C5orf64Q2M2E5 130 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 TMEM14EPQ6UXP3 125 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 STPG2Q8N412 459 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 BSCL2Q96G97 398 aaPredicted RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 ZNF471Q9BX82 626 aaPredicted RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 SMIM3Q9BZL3 60 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 C1RLQ9NZP8 487 aa8.97□□□□□ -0.97
LINC00539-203ENST00000434601 STRAPQ9Y3F4 350 aaKnown RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 SOX21Q9Y651 276 aaPredicted RBP8.97□□□□□ -0.97
LINC00539-203ENST00000434601 CGB1A6NKQ9 187 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 NCBP2LA6PVI3 153 aaKnown RBP8.96□□□□□ -0.98
LINC00539-203ENST00000434601 C15orf62A8K5M9 175 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 INS-IGF2F8WCM5 200 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 CA2P00918 260 aa8.96□□□□□ -0.98
LINC00539-203ENST00000434601 GNB1P62873 340 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms