RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 A0A1B0GUS0 222 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 A0A1B0GW64 132 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 TEX22C9J3V5 150 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 SIX6O95475 246 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 NKX2-1P43699 371 aaPredicted RBP9.69□□□□□ -0.86
LINC00339-204ENST00000434233 TNFRSF9Q07011 255 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 CXorf66Q5JRM2 361 aaPredicted RBP9.69□□□□□ -0.86
LINC00339-204ENST00000434233 UNQ5815/PRO19632Q6UWF5 114 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 MRPL41Q8IXM3 137 aaKnown RBP9.69□□□□□ -0.86
LINC00339-204ENST00000434233 STPG2Q8N412 459 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 TTC9CQ8N5M4 171 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 LFNGQ8NES3 379 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 LINC01006Q8NI28 216 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 GRPEL2Q8TAA5 225 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 TEP1Q99973 2627 aaKnown RBP9.69□□□□□ -0.86
LINC00339-204ENST00000434233 FAM103A1Q9BTL3 118 aaKnown RBP9.69□□□□□ -0.86
LINC00339-204ENST00000434233 ZFP57Q9NU63 452 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 CUBNO60494 3623 aa9.69□□□□□ -0.86
LINC00339-204ENST00000434233 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 CLPSL1A2RUU4 121 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 SYNGR2O43760 224 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 LY86O95711 162 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 CRYGCP07315 174 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 CXCL3P19876 107 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 PPIFP30405 207 aaKnown RBP9.68□□□□□ -0.86
LINC00339-204ENST00000434233 H2BFSP57053 126 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 ERHP84090 104 aaKnown RBP9.68□□□□□ -0.86
LINC00339-204ENST00000434233 FOXL1Q12952 345 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 C19orf54Q5BKX5 351 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 ASPHD1Q5U4P2 390 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 OR11H7Q8NGC8 314 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 ASB13Q8WXK3 278 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00339-204ENST00000434233 NOL4LQ96MY1 436 aaPredicted RBP9.68□□□□□ -0.86
LINC00339-204ENST00000434233 HINT2Q9BX68 163 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 WNT10AQ9GZT5 417 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 RBKSQ9H477 322 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 PLEKHA3Q9HB20 300 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 ENY2Q9NPA8 101 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 LINC00527Q9UJ94 153 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 WSB1Q9Y6I7 421 aa9.68□□□□□ -0.86
LINC00339-204ENST00000434233 IGLC7A0M8Q6 106 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 TMEM89A2RUT3 159 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 NPIPB5A8MRT5 1133 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 CEBPZOSA8MTT3 80 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 G3V318 75 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 PSMB6P28072 239 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 SLC35B1P78383 322 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 WT1-ASQ06250 92 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 CENPVQ7Z7K6 275 aaPredicted RBP9.67□□□□□ -0.86
LINC00339-204ENST00000434233 OR2C3Q8N628 320 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.67□□□□□ -0.86
LINC00339-204ENST00000434233 OR10W1Q8NGF6 305 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 CHAC2Q8WUX2 184 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 ZNF436Q9C0F3 470 aaPredicted RBP9.67□□□□□ -0.86
LINC00339-204ENST00000434233 HIPK2Q9H2X6 1198 aa9.67□□□□□ -0.86
LINC00339-204ENST00000434233 WRBO00258 174 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 NXPH3O95157 252 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 BRI3O95415 125 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 MBPP02686 304 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-204ENST00000434233 OR13C7P0DN81 318 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 CTRB1P17538 263 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 HOXA1P49639 335 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-204ENST00000434233 POLR2GP62487 172 aaKnown RBP eCLIP9.66□□□□□ -0.86
LINC00339-204ENST00000434233 CFHR3Q02985 330 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 KLK9Q2XQG4 91 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 SPINK9Q5DT21 86 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 CTRB2Q6GPI1 263 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 OR5T1Q8NG75 326 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 FAM110DQ8TAY7 271 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-204ENST00000434233 DTD1Q8TEA8 209 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 CIB3Q96Q77 187 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-204ENST00000434233 HEYLQ9NQ87 328 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-204ENST00000434233 KLK9Q9UKQ9 250 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 RNF114Q9Y508 228 aa9.66□□□□□ -0.86
LINC00339-204ENST00000434233 PSMB11A5LHX3 300 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 H3BUA1 57 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 K7EPK0 472 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 SCGB1D2O95969 90 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 IGHG4P01861 327 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 RLN2P04090 185 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 GIPP09681 153 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-204ENST00000434233 APELAP0DMC3 54 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 AREGP15514 252 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 MDKP21741 143 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-204ENST00000434233 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00339-204ENST00000434233 ATP5IP56385 69 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-204ENST00000434233 TAS2R30P59541 319 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 RAB32Q13637 225 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 KRTAP24-1Q3LI83 254 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 TEX38Q6PEX7 206 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 COMMD1Q8N668 190 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 OR1L6Q8NGR2 347 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 WDR89Q96FK6 387 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-204ENST00000434233 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 RAB40CQ96S21 281 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 MAGT1Q9H0U3 335 aa9.65□□□□□ -0.86
LINC00339-204ENST00000434233 U3KQ87 197 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms