RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 C20orf196Q8IYI0 205 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 KRT222Q8N1A0 295 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 CLDND2Q8NHS1 167 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 CMTM2Q8TAZ6 248 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 SMCR5Q8TEV8 140 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 DNAJC9Q8WXX5 260 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 AP3S1Q92572 193 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 OR52E6Q96RD3 313 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 MED29Q9NX70 200 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 FBXL12Q9NXK8 326 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 IL36BQ9NZH7 164 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 SS18L2Q9UHA2 77 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 ZNF337Q9Y3M9 751 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 ROBO3Q96MS0 1386 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 ADGRL1O94910 1474 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 NACADO15069 1562 aa1.28□□□□□ -2.2
PTPN4-205ENST00000433888 DICER1Q9UPY3 1922 aaKnown RBP1.27□□□□□ -2.21
PTPN4-205ENST00000433888 ZNF106Q9H2Y7 1883 aaKnown RBP1.27□□□□□ -2.21
PTPN4-205ENST00000433888 ADGRL3Q9HAR2 1447 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 A0A1B0GV50 99 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 EXOC1LA0A1B0GW35 172 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 PQLC2LA1A4F0 135 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 FAM159BA6NKW6 160 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 ODF3BA8MYP8 253 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 C1orf196B1AJZ1 125 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 TMEM238C9JI98 176 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 OR7C1O76099 320 aaPredicted RBP1.27□□□□□ -2.21
PTPN4-205ENST00000433888 HAND1O96004 215 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 IGKV1-5P01602 117 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 PRM2P04554 102 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 CST2P09228 141 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 GABRA4P48169 554 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 HINT1P49773 126 aaPredicted RBP1.27□□□□□ -2.21
PTPN4-205ENST00000433888 AGTRAPQ6RW13 159 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 SLC35E3Q7Z769 313 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 CLVS1Q8IUQ0 354 aaPredicted RBP1.27□□□□□ -2.21
PTPN4-205ENST00000433888 PXT1Q8NFP0 134 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 C20orf166-AS1Q96NR2 134 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 TMEM222Q9H0R3 208 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 AK3Q9UIJ7 227 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 CCL26Q9Y258 94 aa1.27□□□□□ -2.21
PTPN4-205ENST00000433888 KLK5Q9Y337 293 aaPredicted RBP1.27□□□□□ -2.21
PTPN4-205ENST00000433888 CPAMD8Q8IZJ3 1885 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 KIF13BQ9NQT8 1826 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 DCCP43146 1447 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 TRAV9-1A0A075B6T8 112 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 GRIFINA4D1Z8 144 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 TRAPPC2LH3BP13 241 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 PIRO00625 290 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 HMGB3O15347 200 aaKnown RBP1.26□□□□□ -2.21
PTPN4-205ENST00000433888 KLRC4O43908 158 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 NOS1APO75052 506 aaPredicted RBP1.26□□□□□ -2.21
PTPN4-205ENST00000433888 LGALS1P09382 135 aaKnown RBP1.26□□□□□ -2.21
PTPN4-205ENST00000433888 MAGEA12P43365 314 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 RAB14P61106 215 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 FKBP1AP62942 108 aaKnown RBP1.26□□□□□ -2.21
PTPN4-205ENST00000433888 ZNF181Q2M3W8 571 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 Q6ZS52 159 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 OR52L1Q8NGH7 329 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 OR4C16Q8NGL9 310 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 NEK7Q8TDX7 302 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 CT55Q8WUE5 264 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 BORCS7Q96B45 105 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 ROPN1LQ96C74 230 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 BTF3L4Q96K17 158 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 TSPAN32Q96QS1 320 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 NIPSNAP1Q9BPW8 284 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 DERL1Q9BUN8 251 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 COMMD5Q9GZQ3 224 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 TUBA4BQ9H853 241 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 PRTFDC1Q9NRG1 225 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 STOML2Q9UJZ1 356 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 PLXND1Q9Y4D7 1925 aa1.26□□□□□ -2.21
PTPN4-205ENST00000433888 NCKAP5O14513 1909 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 TRAV38-1A0A0B4J264 116 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 TRAV41A0A0B4J266 112 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 A0A0G2JQZ4 141 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 DPRXA6NFQ7 191 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 CST8O60676 142 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 NDUFB2O95178 105 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 NPYP01303 97 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 SERPINE1P05121 402 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 FABP1P07148 127 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 RPS4Y1P22090 263 aaKnown RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H2BOP23527 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 MSNP26038 577 aaKnown RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 SRIP30626 198 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H2BBP33778 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 EVX1P49640 407 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 ZNF80P51504 273 aaPredicted RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 AQP4P55087 323 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H2BDP58876 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 TAS2R41P59536 307 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 POLR2GP62487 172 aaKnown RBP eCLIP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 RHOBP62745 196 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H2BCP62807 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 SUPT4H1P63272 117 aaKnown RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 RPL19P84098 196 aaKnown RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 CAV1Q03135 178 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms