RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SGMS2Q8NHU3 365 aa0.67□□□□□ -2.3
CDC40-204ENST00000431461 SPACA4Q8TDM5 124 aa0.67□□□□□ -2.3
CDC40-204ENST00000431461 RNASE6Q93091 150 aaKnown RBP0.67□□□□□ -2.3
CDC40-204ENST00000431461 Q96M85 177 aa0.67□□□□□ -2.3
CDC40-204ENST00000431461 ERMAPQ96PL5 475 aaPredicted RBP0.67□□□□□ -2.3
CDC40-204ENST00000431461 SERPINI1Q99574 410 aa0.67□□□□□ -2.3
CDC40-204ENST00000431461 RETNLBQ9BQ08 111 aa0.67□□□□□ -2.3
CDC40-204ENST00000431461 FUT9Q9Y231 359 aa0.67□□□□□ -2.3
CDC40-204ENST00000431461 RP1L1Q8IWN7 2480 aaPredicted RBP0.67□□□□□ -2.3
CDC40-204ENST00000431461 FLT4P35916 1363 aa0.67□□□□□ -2.3
CDC40-204ENST00000431461 RTTNQ86VV8 2226 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 PTPRSQ13332 1948 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 TRBV20OR9-2A0A075B6H5 130 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 A0A0D9SG52 128 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 GGT3PA6NGU5 568 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 C19orf84I3L1E1 186 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 I3L521 148 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 LST1O00453 97 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 COCHO43405 550 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 NSA2O95478 260 aaKnown RBP0.66□□□□□ -2.3
CDC40-204ENST00000431461 IFNA10P01566 189 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 SHBGP04278 402 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 PRM2P04554 102 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 CD79AP11912 226 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 CCL5P13501 91 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 ZNF80P51504 273 aaPredicted RBP0.66□□□□□ -2.3
CDC40-204ENST00000431461 BLVRAP53004 296 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 PLCXD2Q0VAA5 305 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 DEFB115Q30KQ5 88 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 COQ5Q5HYK3 327 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 SPANXN5Q5MJ07 72 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 SPANXN3Q5MJ09 141 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 LPCAT3Q6P1A2 487 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 AAED1Q7RTV5 226 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 IQCF2Q8IXL9 164 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 C1orf158Q8N1D5 194 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 TMEM156Q8N614 296 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 OR13C4Q8NGS5 318 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 RASSF5Q8WWW0 418 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 TMEM106AQ96A25 262 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 IMP4Q96G21 291 aaKnown RBP0.66□□□□□ -2.3
CDC40-204ENST00000431461 ADAT1Q9BUB4 502 aaKnown RBP0.66□□□□□ -2.3
CDC40-204ENST00000431461 TTTY13Q9BZ97 58 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 TRABDQ9H4I3 376 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 CXorf21Q9HAI6 301 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 PRTFDC1Q9NRG1 225 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 NHP2Q9NX24 153 aaKnown RBP0.66□□□□□ -2.3
CDC40-204ENST00000431461 IL36BQ9NZH7 164 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 CKLFQ9UBR5 152 aa0.66□□□□□ -2.3
CDC40-204ENST00000431461 RBM7Q9Y580 266 aaKnown RBP0.66□□□□□ -2.3
CDC40-204ENST00000431461 FN1P02751 2386 aaKnown RBP0.65□□□□□ -2.3
CDC40-204ENST00000431461 KIAA2026Q5HYC2 2103 aa0.65□□□□□ -2.3
CDC40-204ENST00000431461 PSMD12O00232 456 aaPredicted RBP0.65□□□□□ -2.31
CDC40-204ENST00000431461 OR5F1O95221 314 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 TCL1BO95988 128 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 PMP2P02689 132 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 CALB1P05937 261 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 TFPTP0C1Z6 253 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 COX6A1P12074 109 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 SULT1A1P50225 295 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 CEBPGP53567 150 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 PMAIP1Q13794 54 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 MOGQ16653 247 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 HIST2H3PS2Q5TEC6 136 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 SYPL2Q5VXT5 272 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 PHF13Q86YI8 300 aaPredicted RBP0.65□□□□□ -2.31
CDC40-204ENST00000431461 MRPL30Q8TCC3 161 aaKnown RBP0.65□□□□□ -2.31
CDC40-204ENST00000431461 C4orf3Q8WVX3 66 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 PTH2Q96A98 100 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 SCGB3A1Q96QR1 104 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 EFCAB1Q9HAE3 211 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 PAQR5Q9NXK6 330 aaPredicted RBP0.65□□□□□ -2.31
CDC40-204ENST00000431461 BAIAP2Q9UQB8 552 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 TIMM22Q9Y584 194 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 LHFPL6Q9Y693 200 aa0.65□□□□□ -2.31
CDC40-204ENST00000431461 J3QRK9 145 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 OR2B3O76000 313 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 PPBPP02775 128 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HTR1AP08908 422 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 LYNX1P0DP58 116 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 CCL1P22362 96 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H2BOP23527 126 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H2BBP33778 126 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H2BDP58876 126 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H2BCP62807 126 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 ZNF345Q14585 488 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST2H2BEQ16778 126 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.64□□□□□ -2.31
CDC40-204ENST00000431461 PTRHD1Q6GMV3 140 aaKnown RBP0.64□□□□□ -2.31
CDC40-204ENST00000431461 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 DPPA3Q6W0C5 159 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 Q6ZS49 121 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 OR6V1Q8N148 313 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 WFDC11Q8NEX6 87 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H2BHQ93079 126 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 ITFG2Q969R8 447 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 LINC00526Q96FQ7 95 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 ARL5BQ96KC2 179 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H2BNQ99877 126 aa0.64□□□□□ -2.31
CDC40-204ENST00000431461 HIST1H2BMQ99879 126 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms