RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
PTPRA-206ENST00000430705 DEFA4P12838 97 aa12.17□□□□□ -0.46
PTPRA-206ENST00000430705 HERV-K104P61576 105 aa12.17□□□□□ -0.46
PTPRA-206ENST00000430705 ZNF585BQ52M93 769 aa12.17□□□□□ -0.46
PTPRA-206ENST00000430705 ZNF57Q68EA5 555 aaPredicted RBP12.17□□□□□ -0.46
PTPRA-206ENST00000430705 SAMD12Q8N8I0 201 aa12.17□□□□□ -0.46
PTPRA-206ENST00000430705 GDPD1Q8N9F7 314 aa12.17□□□□□ -0.46
PTPRA-206ENST00000430705 SRSF8Q9BRL6 282 aaKnown RBP12.17□□□□□ -0.46
PTPRA-206ENST00000430705 ZNF2Q9BSG1 426 aaPredicted RBP12.17□□□□□ -0.46
PTPRA-206ENST00000430705 ZNF436Q9C0F3 470 aaPredicted RBP12.17□□□□□ -0.46
PTPRA-206ENST00000430705 COMMD5Q9GZQ3 224 aa12.17□□□□□ -0.46
PTPRA-206ENST00000430705 DBX1A6NMT0 343 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 MARCH11A6NNE9 402 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
PTPRA-206ENST00000430705 EIF4EP06730 217 aaKnown RBP12.16□□□□□ -0.46
PTPRA-206ENST00000430705 FAM106AQ4KMX7 169 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 TMEM69Q5SWH9 247 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 LYSMD2Q8IV50 215 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 DMBX1Q8NFW5 382 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 FCAMRQ8WWV6 532 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 S100A16Q96FQ6 103 aaKnown RBP12.16□□□□□ -0.46
PTPRA-206ENST00000430705 CXorf58Q96LI9 332 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 AIFM2Q9BRQ8 373 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 NDUFA4L2Q9NRX3 87 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 NSG2Q9Y328 171 aa12.16□□□□□ -0.46
PTPRA-206ENST00000430705 TGOLN2O43493 480 aa12.15□□□□□ -0.46
PTPRA-206ENST00000430705 F2RP25116 425 aa12.15□□□□□ -0.46
PTPRA-206ENST00000430705 PTBP1P26599 531 aaKnown RBP eCLIP12.15□□□□□ -0.465e-7■■■□□ 18.6
PTPRA-206ENST00000430705 CROCCP3Q8IVE0 287 aa12.15□□□□□ -0.46
PTPRA-206ENST00000430705 CD300LFQ8TDQ1 290 aa12.15□□□□□ -0.46
PTPRA-206ENST00000430705 TMEM190Q8WZ59 177 aa12.15□□□□□ -0.46
PTPRA-206ENST00000430705 IGHV3-21A0A0B4J1V1 117 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 SERPINE2P07093 398 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 TRAPPC2P0DI81 140 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 TRAPPC2BP0DI82 140 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 OR13C7P0DN81 318 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 HRH1P35367 487 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 G6PCP35575 357 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 LPAR6P43657 344 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 OR5H2Q8NGV7 314 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 GPX8Q8TED1 209 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 SLC25A46Q96AG3 418 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 CHRDL1Q9BU40 450 aa12.14□□□□□ -0.47
PTPRA-206ENST00000430705 F11RQ9Y624 299 aaKnown RBP12.14□□□□□ -0.47
PTPRA-206ENST00000430705 OR2T8A6NH00 312 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 K7EIM0 57 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 KRASP01116 189 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 ADMP35318 185 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 TAS2R46P59540 309 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 NCS1P62166 190 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 THOC7Q6I9Y2 204 aaKnown RBP12.13□□□□□ -0.47
PTPRA-206ENST00000430705 TSPAN14Q8NG11 270 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 OR52B4Q8NGK2 314 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 OR1L8Q8NGR8 309 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 VN1R17PQ8TDU5 208 aa12.13□□□□□ -0.47
PTPRA-206ENST00000430705 DGCR14Q96DF8 476 aaKnown RBP12.13□□□□□ -0.47
PTPRA-206ENST00000430705 GPR31O00270 319 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 IGKV1-39P01597 117 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 IGKV1D-39P04432 117 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 HLA-DMAP28067 261 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 ELLP55199 621 aaPredicted RBP12.12□□□□□ -0.47
PTPRA-206ENST00000430705 PLET1Q6UQ28 207 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 SLC16A13Q7RTY0 426 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 CADM3Q8N126 398 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 LSM10Q969L4 123 aaKnown RBP12.12□□□□□ -0.47
PTPRA-206ENST00000430705 MARC2Q969Z3 335 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 OVOL2Q9BRP0 275 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 MRPL27Q9P0M9 148 aaKnown RBP12.12□□□□□ -0.47
PTPRA-206ENST00000430705 OR51B2Q9Y5P1 312 aa12.12□□□□□ -0.47
PTPRA-206ENST00000430705 PRSS3P35030 304 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 ERVK-16P61578 105 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 SCARB1Q8WTV0 552 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 BORCS5Q969J3 196 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 GGTLC1Q9BX51 225 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 TMEM14BQ9NUH8 114 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 THYN1Q9P016 225 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 UFC1Q9Y3C8 167 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 FRAS1Q86XX4 4008 aa12.11□□□□□ -0.47
PTPRA-206ENST00000430705 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 A0A087WXM4 84 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 TRAV25A0A0B4J276 109 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 HSD17B13Q7Z5P4 300 aaPredicted RBP12.1□□□□□ -0.47
PTPRA-206ENST00000430705 OR6F1Q8NGZ6 308 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
PTPRA-206ENST00000430705 SEC22AQ96IW7 307 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 FUNDC2Q9BWH2 189 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 C5orf66Q9H5L9 145 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 COMMD3Q9UBI1 195 aa12.1□□□□□ -0.47
PTPRA-206ENST00000430705 KMT2AQ03164 3969 aa12.09□□□□□ -0.47
PTPRA-206ENST00000430705 ELK1P19419 428 aa12.09□□□□□ -0.47
PTPRA-206ENST00000430705 VBP1P61758 197 aa12.09□□□□□ -0.47
PTPRA-206ENST00000430705 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPRA-206ENST00000430705 TBC1D26Q86UD7 250 aa12.09□□□□□ -0.47
PTPRA-206ENST00000430705 SNX29P2Q8IUI4 249 aa12.09□□□□□ -0.47
PTPRA-206ENST00000430705 CMTM1Q8IZ96 169 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms