RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 BORCS8Q96FH0 119 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 OR10C1Q96KK4 312 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 POM121L2Q96KW2 1035 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 TSNAXQ99598 290 aaKnown RBP4.8□□□□□ -1.64
PTPRK-211ENST00000429595 GINS3Q9BRX5 216 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 BANF2Q9H503 90 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 NAA60Q9H7X0 242 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 METTL8Q9H825 291 aaKnown RBP4.8□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF286AQ9HBT8 521 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 FAM212BQ9NTI7 297 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-211ENST00000429595 EHFQ9NZC4 300 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
PTPRK-211ENST00000429595 TCF19Q9Y242 345 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 STARD10Q9Y365 291 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 STRAPQ9Y3F4 350 aaKnown RBP4.8□□□□□ -1.64
PTPRK-211ENST00000429595 MUC4Q99102 2169 aa4.8□□□□□ -1.64
PTPRK-211ENST00000429595 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 LOC100509620A0A075B734 347 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 BORCS7-ASMTA0A0B4J1R7 106 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 C13orf42A0A1B0GVH6 325 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 PQLC2LA1A4F0 135 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 FAM90A9PA6NNJ1 464 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 NPIPB11E5RHQ5 1161 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 CCL24O00175 119 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 NDUFB3O43676 98 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 NAPSAO96009 420 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 GYPAP02724 150 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF728P0DKX0 622 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 SLC2A1P11166 492 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 FOLR2P14207 255 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF32P17041 273 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ACKR3P25106 362 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 UCP1P25874 307 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 RPL12P30050 165 aaKnown RBP4.79□□□□□ -1.64
PTPRK-211ENST00000429595 RAB13P51153 203 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 INSL3P51460 131 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 DLX1P56177 255 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF92Q03936 586 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 BTN1A1Q13410 526 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 KIR2DS1Q14954 304 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 MSMO1Q15800 293 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 CEACAM21Q3KPI0 293 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 RNF212Q495C1 297 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 SMUG1Q53HV7 270 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF880Q6PDB4 577 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 MKXQ8IYA7 352 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 GAPTQ8N292 157 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF114Q8NC26 417 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 LFNGQ8NES3 379 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 OR1S2Q8NGQ3 325 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 AKR7LQ8NHP1 331 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 CASTOR1Q8WTX7 329 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 H1FXQ92522 213 aaKnown RBP4.79□□□□□ -1.64
PTPRK-211ENST00000429595 APOBEC3DQ96AK3 386 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-211ENST00000429595 AKR1E2Q96JD6 320 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 P2RX4Q99571 388 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 SPIN2AQ99865 258 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 SPIN2BQ9BPZ2 258 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 CMSS1Q9BQ75 279 aaKnown RBP4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF2Q9BSG1 426 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-211ENST00000429595 PKIBQ9C010 78 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-211ENST00000429595 WNT5BQ9H1J7 359 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 C11orf1Q9H5F2 150 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 SEBOXQ9HB31 216 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-211ENST00000429595 C12orf4Q9NQ89 552 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 ZC4H2Q9NQZ6 224 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 UFSP2Q9NUQ7 469 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 UQCC1Q9NVA1 299 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 MPC1Q9Y5U8 109 aa4.79□□□□□ -1.64
PTPRK-211ENST00000429595 IGKV1-27A0A075B6S5 117 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 A0A1W2PP11 408 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 PSMB11A5LHX3 300 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 A6NDX4 124 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 OOEPA6NGQ2 149 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 OR5B21A6NL26 309 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 FAM25EA8MYX2 175 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 UMAD1C9J7I0 102 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 PRAC2D3DTV9 90 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 K7EPK0 472 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 CCSO14618 274 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 APOC3P02656 99 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 CSN2P05814 226 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 SPP1P10451 314 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 SERPINA2P20848 420 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 CNTFRP26992 372 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 MAS1LP35410 378 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 CD200P41217 278 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 GLP1RP43220 463 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 RBM11P57052 281 aaKnown RBP4.78□□□□□ -1.64
PTPRK-211ENST00000429595 RPL23AP62750 156 aaKnown RBP4.78□□□□□ -1.64
PTPRK-211ENST00000429595 OR8G1Q15617 311 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 IAH1Q2TAA2 248 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-211ENST00000429595 SNAI3Q3KNW1 292 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 GGNBP1Q5YKI7 109 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 DPPA3Q6W0C5 159 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 LINC00336Q6ZUF6 198 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 C6orf201Q7Z4U5 140 aa4.78□□□□□ -1.64
PTPRK-211ENST00000429595 ZNF695Q8IW36 515 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms