RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 Q6ZRG5 221 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 LINC00311Q8N616 119 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 KIR3DL3Q8N743 410 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 OR10A7Q8NGE5 316 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 OR5AN1Q8NGI8 311 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 AKR1E2Q96JD6 320 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 SSX3Q99909 188 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 ZFP57Q9NU63 452 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 LIN7CQ9NUP9 197 aaKnown RBP7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMEM140Q9NV12 185 aa7.61□□□□□ -1.19
HMGCLL1-206ENST00000428842 GPR137BO60478 399 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 IGLV2-23P01705 113 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 SFTA3P0C7M3 94 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 SEC11BP0C7V7 166 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 MMDQ15546 238 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 MRGPRG-AS1Q2M3A8 158 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 NMSQ5H8A3 153 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 LINC00518Q8N0U6 118 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 BSCL2Q96G97 398 aaPredicted RBP7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 EAF1Q96JC9 268 aaPredicted RBP7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 GINS3Q9BRX5 216 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 C9JQL5 133 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 RBP4P02753 201 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 P2RY1P47900 373 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 CATR1Q13166 79 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 C1orf122Q6ZSJ8 110 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 LGI3Q8N145 548 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 FLYWCH2Q96CP2 140 aaKnown RBP7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 C1orf159Q96HA4 380 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMEM56Q96MV1 263 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 SCRT1Q9BWW7 348 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 WFDC1Q9HC57 220 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMEM56-RWDD3S4R434 201 aa7.6□□□□□ -1.19
HMGCLL1-206ENST00000428842 CHST1O43916 411 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 SSSCA1O60232 199 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 BLCAPP62952 87 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 SSBP2P81877 361 aaPredicted RBP7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 COMMD1Q8N668 190 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 OR4D5Q8NGN0 318 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 SMIM3Q9BZL3 60 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 C11orf1Q9H5F2 150 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 FAM212BQ9NTI7 297 aaPredicted RBP7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 WRBO00258 174 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 PRH1P02810 166 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 SPP1P10451 314 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 THBS3P49746 956 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 ZNF137PP52743 207 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 NDPQ00604 133 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 ZNF66Q6ZN08 573 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 IQCF2Q8IXL9 164 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 HSPB9Q9BQS6 159 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 ZNF430Q9H8G1 570 aaPredicted RBP7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 RAB9BQ9NP90 201 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 CACFD1Q9UGQ2 172 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 MLXQ9UH92 298 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 FBXO7Q9Y3I1 522 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 TMED3Q9Y3Q3 217 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 RFNGQ9Y644 331 aa7.59□□□□□ -1.19
HMGCLL1-206ENST00000428842 BORCS7-ASMTA0A0B4J1R7 106 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 IGHV3-21A0A0B4J1V1 117 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 HOXA3O43365 443 aaPredicted RBP7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 SNCAP37840 140 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 HOXA1P49639 335 aaPredicted RBP7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 H2BFWTQ7Z2G1 175 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 OR4S2Q8NH73 311 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 SAV1Q9H4B6 383 aaPredicted RBP7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 METTL1Q9UBP6 276 aaKnown RBP7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 SIGLEC9Q9Y336 463 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 WASHC3Q9Y3C0 194 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 S4R3C0 116 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 NOTCH3Q9UM47 2321 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 COLCA2A8K830 154 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 ITGB1BP1O14713 200 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 ST8SIA3O43173 380 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 HPRT1P00492 218 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 APOA2P02652 100 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 FOLR2P14207 255 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 S100GP29377 79 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 PLGLAQ15195 96 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 RTL8BQ17RB0 113 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 MIDNQ504T8 468 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 SIGLECL1Q8N7X8 197 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 RXFP4Q8TDU9 374 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 ESM1Q9NQ30 184 aa7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 RCL1Q9Y2P8 373 aaKnown RBP7.58□□□□□ -1.2
HMGCLL1-206ENST00000428842 CGB1A6NKQ9 187 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 AGPAT2O15120 278 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 AMY1AP04745 511 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 P0C879 139 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 CD99P14209 185 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 TMEM11P17152 192 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 VDAC1P21796 283 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 RAB5CP51148 216 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 SRPXP78539 464 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 RELBQ01201 579 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 PSG5Q15238 335 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 C9orf152Q5JTZ5 239 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 C10orf99Q6UWK7 81 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 OR4C13Q8NGP0 309 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms