RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 OR13C7P0DN81 318 aa12.8□□□□□ -0.36
TRIM39-209ENST00000428728 ZNF585BQ52M93 769 aa12.8□□□□□ -0.36
TRIM39-209ENST00000428728 CROCCP3Q8IVE0 287 aa12.8□□□□□ -0.36
TRIM39-209ENST00000428728 GDPD1Q8N9F7 314 aa12.8□□□□□ -0.36
TRIM39-209ENST00000428728 MOB3AQ96BX8 217 aa12.8□□□□□ -0.36
TRIM39-209ENST00000428728 SRSF8Q9BRL6 282 aaKnown RBP12.8□□□□□ -0.36
TRIM39-209ENST00000428728 THYN1Q9P016 225 aa12.8□□□□□ -0.36
TRIM39-209ENST00000428728 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
TRIM39-209ENST00000428728 IGHV3-21A0A0B4J1V1 117 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 OR2T8A6NH00 312 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 CYB5BO43169 146 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 TRAPPC2P0DI81 140 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 TRAPPC2BP0DI82 140 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 RPS19P39019 145 aaKnown RBP12.79□□□□□ -0.36
TRIM39-209ENST00000428728 TAS2R46P59540 309 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 THOC7Q6I9Y2 204 aaKnown RBP12.79□□□□□ -0.36
TRIM39-209ENST00000428728 SLC25A24Q6NUK1 477 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 OR1L8Q8NGR8 309 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 ANAPC10Q9UM13 185 aa12.79□□□□□ -0.36
TRIM39-209ENST00000428728 LYSTQ99698 3801 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 TEX50A0A1B0GTY4 177 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 TGOLN2O43493 480 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 PGLYRP1O75594 196 aaPredicted RBP12.78□□□□□ -0.36
TRIM39-209ENST00000428728 KRASP01116 189 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 SERPINE2P07093 398 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 F2RP25116 425 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 PTBP1P26599 531 aaKnown RBP eCLIP12.78□□□□□ -0.363e-7■■■■□ 24.4
TRIM39-209ENST00000428728 G6PCP35575 357 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 LPAR6P43657 344 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
TRIM39-209ENST00000428728 TSPAN14Q8NG11 270 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 OR1L6Q8NGR2 347 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 FCAMRQ8WWV6 532 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 MARC2Q969Z3 335 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 GGTLC1Q9BX51 225 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 UFC1Q9Y3C8 167 aa12.78□□□□□ -0.36
TRIM39-209ENST00000428728 FGF2P09038 288 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 HRH1P35367 487 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 MFAP2P55001 183 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 ANKRD55Q3KP44 614 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 PHLDA2Q53GA4 152 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 DHRS11Q6UWP2 260 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 CMTM1Q8IZ96 169 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 IL17DQ8TAD2 202 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 VN1R17PQ8TDU5 208 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 TMEM190Q8WZ59 177 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 DGCR14Q96DF8 476 aaKnown RBP12.77□□□□□ -0.37
TRIM39-209ENST00000428728 YIPF6Q96EC8 236 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.37
TRIM39-209ENST00000428728 VCX3AQ9NNX9 186 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 MRPL27Q9P0M9 148 aaKnown RBP12.77□□□□□ -0.37
TRIM39-209ENST00000428728 OR51B2Q9Y5P1 312 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 SACSQ9NZJ4 4579 aa12.77□□□□□ -0.37
TRIM39-209ENST00000428728 RYR2Q92736 4967 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 IGHV3OR16-8A0A075B7F1 116 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 LOC102724200A0A096LPH7 203 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-209ENST00000428728 GPR31O00270 319 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 SNAPC5O75971 98 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 JTBO76095 146 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
TRIM39-209ENST00000428728 C8orf88P0DMB2 117 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 NAT1P18440 290 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 PRSS3P35030 304 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 ELLP55199 621 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-209ENST00000428728 HSD17B13Q7Z5P4 300 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-209ENST00000428728 UBAC2Q8NBM4 344 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 OR6F1Q8NGZ6 308 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 LSM10Q969L4 123 aaKnown RBP12.76□□□□□ -0.37
TRIM39-209ENST00000428728 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 UBQLN2Q9UHD9 624 aa12.76□□□□□ -0.37
TRIM39-209ENST00000428728 F11RQ9Y624 299 aaKnown RBP12.76□□□□□ -0.37
TRIM39-209ENST00000428728 TRAV25A0A0B4J276 109 aa12.75□□□□□ -0.37
TRIM39-209ENST00000428728 BSCL2Q96G97 398 aaPredicted RBP12.75□□□□□ -0.37
TRIM39-209ENST00000428728 CHRDL1Q9BU40 450 aa12.75□□□□□ -0.37
TRIM39-209ENST00000428728 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
TRIM39-209ENST00000428728 Q56UQ5 140 aa12.74□□□□□ -0.37
TRIM39-209ENST00000428728 OR2C3Q8N628 320 aa12.74□□□□□ -0.37
TRIM39-209ENST00000428728 C20orf24Q9BUV8 137 aa12.74□□□□□ -0.37
TRIM39-209ENST00000428728 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
TRIM39-209ENST00000428728 C21orf62Q9NYP8 219 aa12.74□□□□□ -0.37
TRIM39-209ENST00000428728 COMMD3Q9UBI1 195 aa12.74□□□□□ -0.37
TRIM39-209ENST00000428728 PRNDQ9UKY0 176 aa12.74□□□□□ -0.37
TRIM39-209ENST00000428728 A0A087WXM4 84 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 DBX1A6NMT0 343 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 TSPAN5P62079 268 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 NCS1P62166 190 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 SPSB3Q6PJ21 355 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 SNX29P2Q8IUI4 249 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 LYSMD2Q8IV50 215 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 SLC38A6Q8IZM9 456 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 GPX8Q8TED1 209 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 SCARB1Q8WTV0 552 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 SLC25A46Q96AG3 418 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-209ENST00000428728 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 C5orf66Q9H5L9 145 aa12.73□□□□□ -0.37
TRIM39-209ENST00000428728 C15orf61A6NNL5 157 aa12.72□□□□□ -0.37
TRIM39-209ENST00000428728 F8W735 103 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms