RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PRB3Q04118 309 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-202ENST00000428704 MEF2CQ06413 473 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-202ENST00000428704 ATP6V1FQ16864 119 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 DPPA3Q6W0C5 159 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 STX12Q86Y82 276 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 TPRX1Q8N7U7 411 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 ZNRF1Q8ND25 227 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 LFNGQ8NES3 379 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 OR5C1Q8NGR4 320 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 RNASE11Q8TAA1 199 aaKnown RBP6.96□□□□□ -1.3
HDAC1-202ENST00000428704 UBALD1Q8TB05 177 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 ATP5SQ99766 215 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 SEC11CQ9BY50 192 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 MAGT1Q9H0U3 335 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 UQCC1Q9NVA1 299 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 GFOD1Q9NXC2 390 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 CALYQ9NYX4 217 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 SLC25A10Q9UBX3 287 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-202ENST00000428704 RNF150Q9ULK6 438 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 KPTNQ9Y664 436 aa6.96□□□□□ -1.3
HDAC1-202ENST00000428704 TRGV10A0A0A0MS01 117 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 IGHV1-69DA0A0B4J2H0 117 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 BTBD17A6NE02 478 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 LINC00473A8K010 186 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 C17orf98A8MV24 154 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 RNASEK-C17orf49H0YIS7 233 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 K7EIL1 84 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 IGHV1-69P01742 117 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 ATP6V0CP27449 155 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 GPR12P47775 334 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 DYNLT3P51808 116 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 UBE2KP61086 200 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 RPL15P61313 204 aaKnown RBP6.95□□□□□ -1.3
HDAC1-202ENST00000428704 TNFRSF9Q07011 255 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 EDDM3AQ14507 147 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 LRRC10Q5BKY1 277 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 TMEM14EPQ6UXP3 125 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 Q6ZRG5 221 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 VMO1Q7Z5L0 202 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 CENPVQ7Z7K6 275 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-202ENST00000428704 PUSL1Q8N0Z8 303 aaKnown RBP6.95□□□□□ -1.3
HDAC1-202ENST00000428704 TMEM86BQ8N661 226 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 OR52E5Q8NH55 327 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 RFESDQ8TAC1 157 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 SUN5Q8TC36 379 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 DDB2Q92466 427 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 H1FXQ92522 213 aaKnown RBP6.95□□□□□ -1.3
HDAC1-202ENST00000428704 TNFRSF14Q92956 283 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 LHX4Q969G2 390 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 ADTRPQ96IZ2 230 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 CIB3Q96Q77 187 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-202ENST00000428704 PSMG3Q9BT73 122 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-202ENST00000428704 SCRT1Q9BWW7 348 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 IFI27L2Q9H2X8 130 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 HRH4Q9H3N8 390 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 SIRT7Q9NRC8 400 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 C19orf12Q9NSK7 152 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 PSENENQ9NZ42 101 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 ONECUT1Q9UBC0 465 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 GNG12Q9UBI6 72 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 PSG11Q9UQ72 335 aa6.95□□□□□ -1.3
HDAC1-202ENST00000428704 TRAV1-1A0A0B4J248 108 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 A0A0U1RQK1 487 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 hADV38S2A0JD32 116 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 RAMP3O60896 148 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 IFNA5P01569 189 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 NDUFB7P17568 137 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 SNCAP37840 140 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF134P52741 427 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 EDDM3BP56851 147 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 BPIFB3P59826 476 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 HBG1P69891 147 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 HBG2P69892 147 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 SERF2P84101 59 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 KLRD1Q13241 179 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 POU2AF1Q16633 256 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 LRRC75BQ2VPJ9 315 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 NCR3LG1Q68D85 454 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 HCP5Q6MZN7 132 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 FAM53AQ6NSI3 398 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-202ENST00000428704 H2BFWTQ7Z2G1 175 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 SVBPQ8N300 66 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 C8orf31Q8N9H6 132 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF439Q8NDP4 499 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 OR2G3Q8NGZ4 309 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 TCTEX1D2Q8WW35 142 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 GAR1Q9NY12 217 aaKnown RBP6.94□□□□□ -1.3
HDAC1-202ENST00000428704 IDI2-AS1Q9NZ38 188 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 PRELID3BQ9Y3B1 194 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 LINC00312Q9Y6C7 94 aa6.94□□□□□ -1.3
HDAC1-202ENST00000428704 TRBV23-1A0A0A0MS06 115 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 PMS2P5A8MQ11 134 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 CST7O76096 145 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 S1PR2O95136 353 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 KRASP01116 189 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 APOC3P02656 99 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 IGHV3-43DP0DP04 118 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 G6PCP35575 357 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 CAMLGP49069 296 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms