RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 RPS19P39019 145 aaKnown RBP11.57□□□□□ -0.56
SEC13-210ENST00000428626 CBX5P45973 191 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 KCTD21Q4G0X4 260 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 SLC16A13Q7RTY0 426 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 GDPD1Q8N9F7 314 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 DMBX1Q8NFW5 382 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 FCAMRQ8WWV6 532 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 MOB3AQ96BX8 217 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 SRSF8Q9BRL6 282 aaKnown RBP11.57□□□□□ -0.56
SEC13-210ENST00000428626 OVOL2Q9BRP0 275 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 AIFM2Q9BRQ8 373 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 ZNF2Q9BSG1 426 aaPredicted RBP11.57□□□□□ -0.56
SEC13-210ENST00000428626 FXYD6Q9H0Q3 95 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 COMMD9Q9P000 198 aa11.57□□□□□ -0.56
SEC13-210ENST00000428626 DBX1A6NMT0 343 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 MARCH11A6NNE9 402 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 TGOLN2O43493 480 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 SERPINE2P07093 398 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 FGF2P09038 288 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 NAT1P18440 290 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 TAS2R20P59543 309 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 HERV-K104P61576 105 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 PLET1Q6UQ28 207 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 LYSMD2Q8IV50 215 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 TMEM190Q8WZ59 177 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 YIPF6Q96EC8 236 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 CHRDL1Q9BU40 450 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 IFT46Q9NQC8 304 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 NDUFA4L2Q9NRX3 87 aa11.56□□□□□ -0.56
SEC13-210ENST00000428626 OR2T8A6NH00 312 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 TRAPPC2P0DI81 140 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 TRAPPC2BP0DI82 140 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 F2RP25116 425 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 ADMP35318 185 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 LPAR6P43657 344 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 LSM3P62310 102 aaKnown RBP11.55□□□□□ -0.56
SEC13-210ENST00000428626 EWSR1Q01844 656 aaKnown RBP eCLIP11.55□□□□□ -0.56
SEC13-210ENST00000428626 UBE2NLQ5JXB2 153 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 SAMD12Q8N8I0 201 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 CD300LFQ8TDQ1 290 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 S100A16Q96FQ6 103 aaKnown RBP11.55□□□□□ -0.56
SEC13-210ENST00000428626 GGTLC1Q9BX51 225 aa11.55□□□□□ -0.56
SEC13-210ENST00000428626 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
SEC13-210ENST00000428626 IGHV3OR16-8A0A075B7F1 116 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 K7EIM0 57 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 KRASP01116 189 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 G6PCP35575 357 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 ELLP55199 621 aaPredicted RBP11.54□□□□□ -0.56
SEC13-210ENST00000428626 SLC25A24Q6NUK1 477 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 OR1L6Q8NGR2 347 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 OR1L8Q8NGR8 309 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 MARC2Q969Z3 335 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 DGCR14Q96DF8 476 aaKnown RBP11.54□□□□□ -0.56
SEC13-210ENST00000428626 HINT2Q9BX68 163 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 UBQLN2Q9UHD9 624 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 UFC1Q9Y3C8 167 aa11.54□□□□□ -0.56
SEC13-210ENST00000428626 F11RQ9Y624 299 aaKnown RBP11.54□□□□□ -0.56
SEC13-210ENST00000428626 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
SEC13-210ENST00000428626 TMEM127O75204 238 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 EIF4EP06730 217 aaKnown RBP11.53□□□□□ -0.56
SEC13-210ENST00000428626 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 TMEM69Q5SWH9 247 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 OR5H2Q8NGV7 314 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 IL17DQ8TAD2 202 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 SCARB1Q8WTV0 552 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 C5orf66Q9H5L9 145 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 THYN1Q9P016 225 aa11.53□□□□□ -0.56
SEC13-210ENST00000428626 ZNF207O43670 478 aaKnown RBP11.52□□□□□ -0.57
SEC13-210ENST00000428626 JTBO76095 146 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 IGKV1-39P01597 117 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 IGKV1D-39P04432 117 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 HLA-DMAP28067 261 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 HRH1P35367 487 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 ERVK-16P61578 105 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 ANKRD55Q3KP44 614 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 THOC7Q6I9Y2 204 aaKnown RBP11.52□□□□□ -0.57
SEC13-210ENST00000428626 RBPMS2Q6ZRY4 209 aaKnown RBP11.52□□□□□ -0.57
SEC13-210ENST00000428626 OR2C3Q8N628 320 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 LSM10Q969L4 123 aaKnown RBP11.52□□□□□ -0.57
SEC13-210ENST00000428626 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 OR51B2Q9Y5P1 312 aa11.52□□□□□ -0.57
SEC13-210ENST00000428626 GPR31O00270 319 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 TSPAN4O14817 238 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 TAS2R46P59540 309 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 HSD17B13Q7Z5P4 300 aaPredicted RBP11.51□□□□□ -0.57
SEC13-210ENST00000428626 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 CADM3Q8N126 398 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 GPX8Q8TED1 209 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 BSCL2Q96G97 398 aaPredicted RBP11.51□□□□□ -0.57
SEC13-210ENST00000428626 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
SEC13-210ENST00000428626 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
SEC13-210ENST00000428626 TMEM14BQ9NUH8 114 aa11.51□□□□□ -0.57
SEC13-210ENST00000428626 NDUFA4O00483 81 aa11.5□□□□□ -0.57
SEC13-210ENST00000428626 CTSGP08311 255 aa11.5□□□□□ -0.57
SEC13-210ENST00000428626 PRSS3P35030 304 aa11.5□□□□□ -0.57
SEC13-210ENST00000428626 OR6F1Q8NGZ6 308 aa11.5□□□□□ -0.57
SEC13-210ENST00000428626 BORCS5Q969J3 196 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms