RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PATZ1Q9HBE1 687 aaKnown RBP8.42□□□□□ -1.06
HDAC9-210ENST00000428307 SIRT7Q9NRC8 400 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 FKBP11Q9NYL4 201 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 ARHGAP32A7KAX9 2087 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 FLNCQ14315 2725 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 MBP02144 154 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 HSPB1P04792 205 aaKnown RBP8.42□□□□□ -1.06
HDAC9-210ENST00000428307 BCL2P10415 239 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 IL3RAP26951 378 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 ZNF137PP52743 207 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 MLANAQ16655 118 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 KHDC3LQ587J8 217 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 MIC13Q5XKP0 118 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 MOB3BQ86TA1 216 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 DTX2Q86UW9 622 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 OR5B3Q8NH48 314 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 MGST2Q99735 147 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 GGACTQ9BVM4 153 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 CLEC7AQ9BXN2 247 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 CHODLQ9H9P2 273 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 NPVFQ9HCQ7 196 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 TPSG1Q9NRR2 321 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 INSIG2Q9Y5U4 225 aa8.42□□□□□ -1.06
HDAC9-210ENST00000428307 LOC102723971A0A1B0GUV8 181 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 C7orf77A4D0Y5 90 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 BUB1B-PAK6H3BSN5 160 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 IGLV2-23P01705 113 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 LIPFP07098 398 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 MC5RP33032 325 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 RAB13P51153 203 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 DLK1P80370 383 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 FAM71F2Q6NXP2 309 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 PNKDQ8N490 385 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 C1orf159Q96HA4 380 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 ACTR3CQ9C0K3 210 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-210ENST00000428307 ZNF430Q9H8G1 570 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-210ENST00000428307 CTXND1A0A1B0GTU2 59 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 hCG_1809904A0A1W2PP81 198 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 A0A1W2PPE2 198 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 A0A1W2PR64 198 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 A0A1W2PRV1 198 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 CYB5BO43169 146 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 USF1P22415 310 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-210ENST00000428307 PAX6P26367 422 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 ACOT6Q3I5F7 207 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-210ENST00000428307 OR1L8Q8NGR8 309 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 VSTM2AQ8TAG5 236 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 GATAD1Q8WUU5 269 aa8.41□□□□□ -1.06
HDAC9-210ENST00000428307 TMEM8BA6NDV4 472 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 H3BQ15 152 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 CNTFRP26992 372 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 TEPPQ6URK8 271 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 OR4P4Q8NGL7 312 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 TMEM167AQ8TBQ9 72 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 IGFBPL1Q8WX77 278 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 TNFRSF14Q92956 283 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 RPEQ96AT9 228 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 PCGF1Q9BSM1 259 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 SSBP3Q9BWW4 388 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-210ENST00000428307 GGTLC1Q9BX51 225 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 UNKLQ9H9P5 680 aaKnown RBP8.4□□□□□ -1.06
HDAC9-210ENST00000428307 NDUFA4L2Q9NRX3 87 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 PXMP4Q9Y6I8 212 aa8.4□□□□□ -1.06
HDAC9-210ENST00000428307 CSMD1Q96PZ7 3565 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 PLXNB1O43157 2135 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 LOC105371242A0A075B767 164 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 IGHV1-3A0A0C4DH29 117 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 LOC105371267A0A1B0GV96 52 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 A0A1W2PRD5 423 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 A0A1W2PRF3 423 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 A0A1W2PRM7 423 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 MPDU1O75352 247 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 YIF1AO95070 293 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 CDC34P49427 236 aaPredicted RBP8.4□□□□□ -1.07
HDAC9-210ENST00000428307 LY6G5BQ8NDX9 201 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 C8orf46Q8TAG6 207 aa8.4□□□□□ -1.07
HDAC9-210ENST00000428307 LSM4Q9Y4Z0 139 aaKnown RBP8.4□□□□□ -1.07
HDAC9-210ENST00000428307 A0A1W2PPV4 95 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 APELAP0DMC3 54 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 IGFBP2P18065 325 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 AGAP20933 346 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 OPRK1P41145 380 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 GPR6P46095 362 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-210ENST00000428307 ERHP84090 104 aaKnown RBP8.39□□□□□ -1.07
HDAC9-210ENST00000428307 WT1-ASQ06250 92 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 VMA21Q3ZAQ7 101 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 LDLRAD2Q5SZI1 272 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 SMCO4Q9NRQ5 59 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 VAX2Q9UIW0 290 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 MYO18BQ8IUG5 2567 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 CGB1A6NKQ9 187 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 REG1AP05451 166 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 RNASE2P10153 161 aaKnown RBP8.39□□□□□ -1.07
HDAC9-210ENST00000428307 LGALS7P47929 136 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 B2MP61769 119 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 KLRD1Q13241 179 aa8.39□□□□□ -1.07
HDAC9-210ENST00000428307 RBMS3Q6XE24 437 aaKnown RBP8.39□□□□□ -1.07
HDAC9-210ENST00000428307 BEND2Q8NDZ0 799 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms