RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 TMEM11P17152 192 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 MAS1LP35410 378 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 HOXA1P49639 335 aaPredicted RBP13.65□□□□□ -0.22
CHEK1-202ENST00000427383 COMPP49747 757 aaPredicted RBP13.65□□□□□ -0.22
CHEK1-202ENST00000427383 TMEM267Q0VDI3 215 aaPredicted RBP13.65□□□□□ -0.22
CHEK1-202ENST00000427383 C9orf139Q6ZV77 190 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 HAPLN4Q86UW8 402 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 OR8H1Q8NGG4 311 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 TMEM170AQ8WVE7 144 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 PLEKHA3Q9HB20 300 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 ZC4H2Q9NQZ6 224 aa13.65□□□□□ -0.22
CHEK1-202ENST00000427383 PMS2P5A8MQ11 134 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 FCN1O00602 326 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 SMAD7O15105 426 aaKnown RBP13.64□□□□□ -0.23
CHEK1-202ENST00000427383 METTL15P1P0C7V9 234 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 BSXQ3C1V8 233 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 TEX261Q6UWH6 196 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 STX12Q86Y82 276 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 STOML3Q8TAV4 291 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 HIPK2Q9H2X6 1198 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 KIAA1456Q9P272 454 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 U3KQ87 197 aa13.64□□□□□ -0.23
CHEK1-202ENST00000427383 CFDP00746 253 aaPredicted RBP13.63□□□□□ -0.23
CHEK1-202ENST00000427383 ARL16Q0P5N6 197 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 AANATQ16613 207 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 OR10W1Q8NGF6 305 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 OR5C1Q8NGR4 320 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 NANPQ8TBE9 248 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 ZNF471Q9BX82 626 aaPredicted RBP13.63□□□□□ -0.23
CHEK1-202ENST00000427383 WFDC1Q9HC57 220 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 HEYLQ9NQ87 328 aaPredicted RBP13.63□□□□□ -0.23
CHEK1-202ENST00000427383 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 STRAPQ9Y3F4 350 aaKnown RBP13.63□□□□□ -0.23
CHEK1-202ENST00000427383 CA2P00918 260 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 TNXAQ16473 311 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 LRRC75BQ2VPJ9 315 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 TMEM217Q8N7C4 229 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 Q8N9W7 124 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 HINT2Q9BX68 163 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 SMIM3Q9BZL3 60 aa13.63□□□□□ -0.23
CHEK1-202ENST00000427383 IGLC7A0M8Q6 106 aa13.62□□□□□ -0.23
CHEK1-202ENST00000427383 RPL27AP46776 148 aaKnown RBP13.62□□□□□ -0.23
CHEK1-202ENST00000427383 UBA52P62987 128 aaKnown RBP13.62□□□□□ -0.23
CHEK1-202ENST00000427383 WT1-ASQ06250 92 aa13.62□□□□□ -0.23
CHEK1-202ENST00000427383 PLGLAQ15195 96 aa13.62□□□□□ -0.23
CHEK1-202ENST00000427383 RPL7L1Q6DKI1 246 aaKnown RBP13.62□□□□□ -0.23
CHEK1-202ENST00000427383 SLC24A4Q8NFF2 622 aa13.62□□□□□ -0.23
CHEK1-202ENST00000427383 ST8SIA2Q92186 375 aa13.62□□□□□ -0.23
CHEK1-202ENST00000427383 CLCC1Q96S66 551 aa13.62□□□□□ -0.23
CHEK1-202ENST00000427383 SSX3Q99909 188 aa13.62□□□□□ -0.23
CHEK1-202ENST00000427383 A0A1W2PN81 502 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 TEX22C9J3V5 150 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 PRSS46E5RG02 174 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 ACTL6BO94805 426 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 CHRNA7P36544 502 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 BCL6BQ8N143 479 aaPredicted RBP13.61□□□□□ -0.23
CHEK1-202ENST00000427383 UBAC2Q8NBM4 344 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 ZNF680Q8NEM1 530 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 SRSF12Q8WXF0 261 aaKnown RBP13.61□□□□□ -0.23
CHEK1-202ENST00000427383 C1RLQ9NZP8 487 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 BAHCC1Q9P281 2608 aa13.61□□□□□ -0.23
CHEK1-202ENST00000427383 MDFIC2A0A1B0GVS7 189 aa13.6□□□□□ -0.23
CHEK1-202ENST00000427383 NCBP2LA6PVI3 153 aaKnown RBP13.6□□□□□ -0.23
CHEK1-202ENST00000427383 CD5LO43866 347 aa13.6□□□□□ -0.23
CHEK1-202ENST00000427383 RBM14Q96PK6 669 aaKnown RBP13.6□□□□□ -0.23
CHEK1-202ENST00000427383 ENY2Q9NPA8 101 aa13.6□□□□□ -0.23
CHEK1-202ENST00000427383 JTBO76095 146 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 IFNA10P01566 189 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 HLA-DRB1P01911 266 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 RNASE2P10153 161 aaKnown RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 TPT1P13693 172 aaKnown RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 NPY1RP25929 384 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 HTR2BP41595 481 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 GNB1P62873 340 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 HBG1P69891 147 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 HBG2P69892 147 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 RPP30P78346 268 aaKnown RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 EXOSC2Q13868 293 aaKnown RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 CLINT1Q14677 625 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 DEFB112Q30KQ8 113 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 ATP5SQ99766 215 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 ARV1Q9H2C2 271 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 ITGB1BP2Q9UKP3 347 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 H3BUX3 64 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 SCAF4O95104 1147 aaKnown RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 SONP18583 2426 aaKnown RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 ATP5IP56385 69 aaPredicted RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 NDPQ00604 133 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 SLC38A11Q08AI6 406 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 TUSC1Q2TAM9 212 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 C2orf83Q53S99 150 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 OR8G2PQ6IF36 304 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 ZNF562Q6V9R5 426 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 BAP18Q8IXM2 172 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 C5orf56Q8N8D9 126 aa13.59□□□□□ -0.23
CHEK1-202ENST00000427383 SRSF8Q9BRL6 282 aaKnown RBP13.59□□□□□ -0.23
CHEK1-202ENST00000427383 A6NDX4 124 aa13.58□□□□□ -0.24
CHEK1-202ENST00000427383 CX3CL1P78423 397 aa13.58□□□□□ -0.24
CHEK1-202ENST00000427383 ZNF266Q14584 549 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms