RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 IGHV3-43A0A0B4J1X8 118 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 A0A0J9YWU9 116 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 LINC00854A0A1B0GVQ3 168 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 FAM240BA0A1B0GVZ2 78 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 CENPXA8MT69 81 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 BUB1B-PAK6H3BSN5 160 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 RBFOX2O43251 390 aaKnown RBP eCLIP4.28□□□□□ -1.72
C9orf3-205ENST00000427193 PGLYRP1O75594 196 aaPredicted RBP4.28□□□□□ -1.72
C9orf3-205ENST00000427193 SLC22A5O76082 557 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 IL5P05113 134 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 OR8U9P0C7N5 309 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 P0C879 139 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 SAA2P0DJI9 122 aaPredicted RBP4.28□□□□□ -1.72
C9orf3-205ENST00000427193 CT45A6P0DMU7 189 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 CT45A5P0DMU8 189 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 CT45A7P0DMV0 189 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 IGHV3-43DP0DP04 118 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 HLA-GP17693 338 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 DUTP33316 252 aaKnown RBP4.28□□□□□ -1.72
C9orf3-205ENST00000427193 RAB7AP51149 207 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 DYNLT3P51808 116 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 DLX1P56177 255 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 RPL30P62888 115 aaKnown RBP4.28□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF816Q0VGE8 651 aaPredicted RBP4.28□□□□□ -1.72
C9orf3-205ENST00000427193 EBI3Q14213 229 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 DIAPH2-AS1Q14236 149 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 TMEM128Q5BJH2 165 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 NCR3LG1Q68D85 454 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 KCTD9Q7L273 389 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 VMO1Q7Z5L0 202 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 TMEM17Q86X19 198 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 SLC38A6Q8IZM9 456 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 SPAG16Q8N0X2 631 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 ABHD12Q8N2K0 398 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 CENPSQ8N2Z9 138 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 ZNF645Q8N7E2 425 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 LRTM2Q8N967 370 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 OR8U1Q8NH10 309 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 MARCH1Q8TCQ1 289 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 GLYATL2Q8WU03 294 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 LEAP2Q969E1 77 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 TMEM56Q96MV1 263 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 CLEC7AQ9BXN2 247 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 C20orf85Q9H1P6 137 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 DPAGT1Q9H3H5 408 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 HEXA-AS1Q9H8Q6 139 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 CCL28Q9NRJ3 127 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 SLC2A9Q9NRM0 540 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 ZNRD1Q9P1U0 126 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 GNG12Q9UBI6 72 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 FLVCR2Q9UPI3 526 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 TMEM56-RWDD3S4R434 201 aa4.28□□□□□ -1.72
C9orf3-205ENST00000427193 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 A0A087X002 238 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 A0A0B4J2A0 478 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 hCG_1809904A0A1W2PP81 198 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 A0A1W2PPE2 198 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 A0A1W2PR64 198 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 A0A1W2PRV1 198 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 CRYM-AS1A6NIL9 109 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 SNRPGP15A8MWD9 76 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 OOSP1A8MZH6 123 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 FAM90A26D6RGX4 464 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 TRIM77I1YAP6 450 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 GPR31O00270 319 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 RAB29O14966 203 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 CDS2O95674 445 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 IGKV1-39P01597 117 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 IGKV1D-39P04432 117 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 IFNA6P05013 189 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 IGHV4-38-2P0DP08 117 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 F2RP25116 425 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 UCP1P25874 307 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 DSCR10P59022 87 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 TSPAN5P62079 268 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 IL15RAQ13261 267 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 DHRS2Q13268 280 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 AANATQ16613 207 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 POU2AF1Q16633 256 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 AARDQ4LEZ3 155 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 MINOS1Q5TGZ0 78 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 METTL11BQ5VVY1 283 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 LPCAT3Q6P1A2 487 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 BTNL3Q6UXE8 466 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 GLDNQ6ZMI3 551 aaPredicted RBP4.27□□□□□ -1.73
C9orf3-205ENST00000427193 DYNAPQ8N1N2 210 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 ZNF383Q8NA42 475 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 OR13D1Q8NGV5 346 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 ZFAND1Q8TCF1 268 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 PIFOQ8TCI5 191 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 MITD1Q8WV92 249 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 C17orf50Q8WW18 174 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 CAPSLQ8WWF8 208 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 RTN4IP1Q8WWV3 396 aaPredicted RBP4.27□□□□□ -1.73
C9orf3-205ENST00000427193 ABHD14BQ96IU4 210 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 SCGB3A2Q96PL1 93 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 NABP2Q9BQ15 211 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 GINS4Q9BRT9 223 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 SUCNR1Q9BXA5 334 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 LPAR2Q9HBW0 351 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms