RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SDF2L1Q9HCN8 221 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 WFDC1Q9HC57 220 aa16.54■□□□□ 0.24
HCG18-235ENST00000426882 LEPROTL1O95214 131 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 PF4V1P10720 104 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 GOLT1AQ6ZVE7 132 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 METTL26Q96S19 204 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 COL4A6Q14031 1691 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 TRBV23-1A0A0A0MS06 115 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 CKS2P33552 79 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 MAS1LP35410 378 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 PLAURQ03405 335 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 BSPH1Q075Z2 132 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 ZNF324BQ6AW86 544 aaPredicted RBP16.53■□□□□ 0.24
HCG18-235ENST00000426882 TMEM183AQ8IXX5 376 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 C16orf92Q96LL3 132 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 SPRR3Q9UBC9 169 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 GFRA1P56159 465 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 SPATA45Q537H7 98 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 COL5A1-AS1Q5SY13 56 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 SEMA5BQ9P283 1151 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 DMRT1Q9Y5R6 373 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 MPDZO75970 2070 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 RAMP3O60896 148 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 ICAM4Q14773 271 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 FAM57AQ8TBR7 257 aa16.53■□□□□ 0.24
HCG18-235ENST00000426882 MYLKQ15746 1914 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 A0A087WWC5 75 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 CGB1A6NKQ9 187 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 TCTAP57738 103 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 LCN2P80188 198 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 SCO2A0A1W2PP80 73 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 CD55P08174 381 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 ABHD17AQ96GS6 310 aa16.52■□□□□ 0.24
HCG18-235ENST00000426882 NPIPB11E5RHQ5 1161 aa16.52■□□□□ 0.23
HCG18-235ENST00000426882 SLC17A3O00476 420 aa16.52■□□□□ 0.23
HCG18-235ENST00000426882 RTN4RL2Q86UN3 420 aa16.52■□□□□ 0.23
HCG18-235ENST00000426882 MRPL20Q9BYC9 149 aaKnown RBP16.52■□□□□ 0.23
HCG18-235ENST00000426882 IL4P05112 153 aa16.52■□□□□ 0.23
HCG18-235ENST00000426882 PMCHL1Q16048 86 aa16.52■□□□□ 0.23
HCG18-235ENST00000426882 ZFP30Q9Y2G7 519 aa16.52■□□□□ 0.23
HCG18-235ENST00000426882 TRBV9A0A0B4J1U6 114 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 IGHV3-35A0A0C4DH35 117 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 RNF224P0DH78 156 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 TUBA4BQ9H853 241 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 THADAQ6YHU6 1953 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 FBXL15Q9H469 300 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 CCL20P78556 96 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 NEU1Q99519 415 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 CLDN16Q9Y5I7 305 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 PI4KAP42356 2102 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 A6NDN8 102 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 YPEL1O60688 119 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 ID1P41134 155 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 YPEL2Q96QA6 119 aa16.51■□□□□ 0.23
HCG18-235ENST00000426882 PHF3Q92576 2039 aaKnown RBP16.51■□□□□ 0.23
HCG18-235ENST00000426882 GATA2P23769 480 aaPredicted RBP16.5■□□□□ 0.23
HCG18-235ENST00000426882 GPX4P36969 197 aaPredicted RBP16.5■□□□□ 0.23
HCG18-235ENST00000426882 HERVK_113P61574 105 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 MEF2CQ06413 473 aaPredicted RBP16.5■□□□□ 0.23
HCG18-235ENST00000426882 C17orf100A8MU93 164 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 NBEAP1P0C6P0 100 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 CEACAM1P13688 526 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 NMUP48645 174 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 CYTL1Q9NRR1 136 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 LINC00312Q9Y6C7 94 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 DOCK8Q8NF50 2099 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 ZNF841Q6ZN19 808 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 QRFPP83859 136 aa16.5■□□□□ 0.23
HCG18-235ENST00000426882 SAA2-SAA4A0A096LPE2 208 aa16.49■□□□□ 0.23
HCG18-235ENST00000426882 SAA2P0DJI9 122 aaPredicted RBP16.49■□□□□ 0.23
HCG18-235ENST00000426882 CD59P13987 128 aa16.49■□□□□ 0.23
HCG18-235ENST00000426882 CCL3L1P16619 93 aa16.49■□□□□ 0.23
HCG18-235ENST00000426882 MORN2Q502X0 79 aa16.49■□□□□ 0.23
HCG18-235ENST00000426882 ZNF738Q8NE65 137 aa16.49■□□□□ 0.23
HCG18-235ENST00000426882 SPTAN1Q13813 2472 aaKnown RBP16.49■□□□□ 0.23
HCG18-235ENST00000426882 RPL13AP40429 203 aaKnown RBP16.49■□□□□ 0.23
HCG18-235ENST00000426882 OR10J6PQ8NGY7 276 aa16.49■□□□□ 0.23
HCG18-235ENST00000426882 RPL24P83731 157 aaKnown RBP16.49■□□□□ 0.23
HCG18-235ENST00000426882 MIR17HGQ75NE6 70 aa16.49■□□□□ 0.23
HCG18-235ENST00000426882 TFPI2P48307 235 aa16.48■□□□□ 0.23
HCG18-235ENST00000426882 RPL23P62829 140 aaKnown RBP16.48■□□□□ 0.23
HCG18-235ENST00000426882 Q0VFX4 171 aa16.48■□□□□ 0.23
HCG18-235ENST00000426882 PSG9Q00887 426 aa16.48■□□□□ 0.23
HCG18-235ENST00000426882 IL36BQ9NZH7 164 aa16.48■□□□□ 0.23
HCG18-235ENST00000426882 UQCR10Q9UDW1 63 aa16.48■□□□□ 0.23
HCG18-235ENST00000426882 NLRC5Q86WI3 1866 aa16.48■□□□□ 0.23
HCG18-235ENST00000426882 E9PQ18 207 aa16.48■□□□□ 0.23
HCG18-235ENST00000426882 HINT1P49773 126 aaPredicted RBP16.47■□□□□ 0.23
HCG18-235ENST00000426882 SRSF9Q13242 221 aaKnown RBP eCLIP16.47■□□□□ 0.236e-7■■□□□ 13.7
HCG18-235ENST00000426882 DPM3Q9P2X0 92 aa16.47■□□□□ 0.23
HCG18-235ENST00000426882 CBLN4Q9NTU7 201 aa16.47■□□□□ 0.23
HCG18-235ENST00000426882 A0A1W2PS18 150 aa16.47■□□□□ 0.23
HCG18-235ENST00000426882 BTF3P20290 206 aaKnown RBP16.47■□□□□ 0.23
HCG18-235ENST00000426882 CACNG8Q8WXS5 425 aa16.47■□□□□ 0.23
HCG18-235ENST00000426882 SAA1P0DJI8 122 aaPredicted RBP16.47■□□□□ 0.23
HCG18-235ENST00000426882 OTX1P32242 354 aaPredicted RBP16.47■□□□□ 0.23
HCG18-235ENST00000426882 IMMP2LQ96T52 175 aa16.47■□□□□ 0.23
HCG18-235ENST00000426882 IGHV1-18A0A0C4DH31 117 aa16.46■□□□□ 0.23
HCG18-235ENST00000426882 TMEM144Q7Z5S9 345 aa16.46■□□□□ 0.23
HCG18-235ENST00000426882 TM4SF20Q53R12 229 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms