RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 GUK1Q16774 197 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 Q8N7P7 452 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 SFT2D1Q8WV19 159 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 CACNG8Q8WXS5 425 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 RSG1Q9BU20 258 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 SEC11CQ9BY50 192 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 EIF5A2Q9GZV4 153 aaKnown RBP7.65□□□□□ -1.18
HMGB4-201ENST00000425537 LPAR2Q9HBW0 351 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 NDUFA4L2Q9NRX3 87 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 KIAA1456Q9P272 454 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 WDR83OSQ9Y284 106 aa7.65□□□□□ -1.18
HMGB4-201ENST00000425537 TBL2Q9Y4P3 447 aaKnown RBP7.65□□□□□ -1.18
HMGB4-201ENST00000425537 SRRM4A7MD48 611 aaKnown RBP7.64□□□□□ -1.19
HMGB4-201ENST00000425537 ODF3BA8MYP8 253 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 F8W036 122 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 SLC25A17O43808 307 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 CA2P00918 260 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 IGHV4-39P01824 125 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 APOC3P02656 99 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 CD5P06127 495 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 GPX4P36969 197 aaPredicted RBP7.64□□□□□ -1.19
HMGB4-201ENST00000425537 OPRK1P41145 380 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 PPT1P50897 306 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 FFAR4Q5NUL3 377 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 ETFRF1Q6IPR1 90 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 TEPPQ6URK8 271 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 SVBPQ8N300 66 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 CLDND2Q8NHS1 167 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 RNASEH2CQ8TDP1 164 aaKnown RBP7.64□□□□□ -1.19
HMGB4-201ENST00000425537 MBD3L1Q8WWY6 194 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 IGFBPL1Q8WX77 278 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 LINC00052Q96N35 136 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
HMGB4-201ENST00000425537 ACTR3CQ9C0K3 210 aaPredicted RBP7.64□□□□□ -1.19
HMGB4-201ENST00000425537 SLC39A9Q9NUM3 307 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
HMGB4-201ENST00000425537 POLR3KQ9Y2Y1 108 aaPredicted RBP7.64□□□□□ -1.19
HMGB4-201ENST00000425537 MALRD1Q5VYJ5 2156 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 CTXND1A0A1B0GTU2 59 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 RBFOX3A6NFN3 312 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 CORTO00230 105 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 RRHO14718 337 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 NDUFS7O75251 213 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 TOX4O94842 621 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 SNAPINO95295 136 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 MOSP00540 346 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 IGLV2-23P01705 113 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 SNRNP70P08621 437 aaKnown RBP7.63□□□□□ -1.19
HMGB4-201ENST00000425537 M6PRP20645 277 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 MDKP21741 143 aaPredicted RBP7.63□□□□□ -1.19
HMGB4-201ENST00000425537 BRS3P32247 399 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 RPL27AP46776 148 aaKnown RBP7.63□□□□□ -1.19
HMGB4-201ENST00000425537 ATP5J2P56134 94 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 LMO4P61968 165 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 LCN2P80188 198 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 AKR1C1Q04828 323 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 PMS2P11Q13670 270 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 PLGLAQ15195 96 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 PSG5Q15238 335 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 PRSS8Q16651 343 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 TUSC1Q2TAM9 212 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 RBMS3Q6XE24 437 aaKnown RBP7.63□□□□□ -1.19
HMGB4-201ENST00000425537 VMO1Q7Z5L0 202 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 OR2T10Q8NGZ9 312 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 C22orf15Q8WYQ4 148 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 SLC35E1Q96K37 410 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 NPCDR1Q9BY65 106 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 BPESC1Q9GZL8 116 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 SIRPDQ9H106 197 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 ZNF430Q9H8G1 570 aaPredicted RBP7.63□□□□□ -1.19
HMGB4-201ENST00000425537 SIRT7Q9NRC8 400 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 RPRMQ9NS64 109 aa7.63□□□□□ -1.19
HMGB4-201ENST00000425537 METTL1Q9UBP6 276 aaKnown RBP7.63□□□□□ -1.19
HMGB4-201ENST00000425537 CARHSP1Q9Y2V2 147 aaKnown RBP7.63□□□□□ -1.19
HMGB4-201ENST00000425537 A0A1W2PPI3 338 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 A0A1W2PPV4 95 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 PRSS46E5RG02 174 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 AGPAT2O15120 278 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 NDUFS6O75380 124 aaKnown RBP7.62□□□□□ -1.19
HMGB4-201ENST00000425537 MT-CO2P00403 227 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 SFTA3P0C7M3 94 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 PAX1P15863 534 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 UBE2E1P51965 193 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 ELLP55199 621 aaPredicted RBP7.62□□□□□ -1.19
HMGB4-201ENST00000425537 DEFA5Q01523 94 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 DIAPH2-AS1Q14236 149 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 HABP2Q14520 560 aaPredicted RBP7.62□□□□□ -1.19
HMGB4-201ENST00000425537 BSXQ3C1V8 233 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 KHDC3LQ587J8 217 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 TREML4Q6UXN2 200 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 PPP1R27Q86WC6 154 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 OR10G4Q8NGN3 311 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 OR10G9Q8NGN4 311 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 OR10G7Q8NGN6 311 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 OR1L6Q8NGR2 347 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 C10orf105Q8TEF2 133 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 MALSU1Q96EH3 234 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 C19orf24Q9BVV8 132 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 SLC35B3Q9H1N7 401 aa7.62□□□□□ -1.19
HMGB4-201ENST00000425537 C1RLQ9NZP8 487 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms