RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 C9JQL5 133 aa21.32■■□□□ 1
LDB1-202ENST00000425280 GUK1Q16774 197 aa21.32■■□□□ 1
LDB1-202ENST00000425280 ACSM6Q6P461 480 aa21.32■■□□□ 1
LDB1-202ENST00000425280 CRYGBP07316 175 aa21.32■■□□□ 1
LDB1-202ENST00000425280 ZNF726P1Q15940 193 aa21.32■■□□□ 1
LDB1-202ENST00000425280 BSXQ3C1V8 233 aa21.32■■□□□ 1
LDB1-202ENST00000425280 C10orf55Q5SWW7 151 aa21.32■■□□□ 1
LDB1-202ENST00000425280 LHFPL4Q7Z7J7 247 aa21.32■■□□□ 1
LDB1-202ENST00000425280 TIMM23O14925 209 aa21.31■■□□□ 1
LDB1-202ENST00000425280 HOXB4P17483 251 aaPredicted RBP21.31■■□□□ 1
LDB1-202ENST00000425280 CEACAM3P40198 252 aa21.31■■□□□ 1
LDB1-202ENST00000425280 PSG5Q15238 335 aa21.31■■□□□ 1
LDB1-202ENST00000425280 TREML4Q6UXN2 200 aa21.31■■□□□ 1
LDB1-202ENST00000425280 HILPDAQ9Y5L2 63 aa21.31■■□□□ 1
LDB1-202ENST00000425280 A0A1W2PRD5 423 aa21.3■■□□□ 1
LDB1-202ENST00000425280 A0A1W2PRF3 423 aa21.3■■□□□ 1
LDB1-202ENST00000425280 A0A1W2PRM7 423 aa21.3■■□□□ 1
LDB1-202ENST00000425280 BTBD17A6NE02 478 aa21.3■■□□□ 1
LDB1-202ENST00000425280 FAM157AC9JC47 383 aa21.3■■□□□ 1
LDB1-202ENST00000425280 INS-IGF2F8WCM5 200 aa21.3■■□□□ 1
LDB1-202ENST00000425280 C2orf83Q53S99 150 aa21.3■■□□□ 1
LDB1-202ENST00000425280 ZNF709Q8N972 641 aa21.3■■□□□ 1
LDB1-202ENST00000425280 RNASE2P10153 161 aaKnown RBP21.3■■□□□ 1
LDB1-202ENST00000425280 RAB2AP61019 212 aa21.3■■□□□ 1
LDB1-202ENST00000425280 ARSJQ5FYB0 599 aaPredicted RBP21.3■■□□□ 1
LDB1-202ENST00000425280 RCC1LQ96I51 464 aaKnown RBP21.3■■□□□ 1
LDB1-202ENST00000425280 TRAV1-1A0A0B4J248 108 aa21.29■■□□□ 1
LDB1-202ENST00000425280 A0A1B0GW64 132 aa21.29■■□□□ 1
LDB1-202ENST00000425280 IGKV1D-33P01593 117 aa21.29■■□□□ 1
LDB1-202ENST00000425280 IGKV1-33P01594 117 aa21.29■■□□□ 1
LDB1-202ENST00000425280 ATP5IP56385 69 aaPredicted RBP21.29■■□□□ 1
LDB1-202ENST00000425280 C10orf91Q5T1B1 145 aa21.29■■□□□ 1
LDB1-202ENST00000425280 SSX7Q7RTT5 188 aa21.29■■□□□ 1
LDB1-202ENST00000425280 FAM168AQ92567 244 aa21.29■■□□□ 1
LDB1-202ENST00000425280 EIF5A2Q9GZV4 153 aaKnown RBP21.29■■□□□ 1
LDB1-202ENST00000425280 A0A1W2PN81 502 aa21.28■■□□□ 1
LDB1-202ENST00000425280 C17orf112F2Z3M2 114 aa21.28■■□□□ 1
LDB1-202ENST00000425280 F8W036 122 aa21.28■■□□□ 1
LDB1-202ENST00000425280 HBE1P02100 147 aa21.28■■□□□ 1
LDB1-202ENST00000425280 CHRNA7P36544 502 aa21.28■■□□□ 1
LDB1-202ENST00000425280 PRSS8Q16651 343 aa21.28■■□□□ 1
LDB1-202ENST00000425280 FFAR4Q5NUL3 377 aa21.28■■□□□ 1
LDB1-202ENST00000425280 MBD3L1Q8WWY6 194 aa21.28■■□□□ 1
LDB1-202ENST00000425280 PIMREGQ9BSJ6 248 aa21.28■■□□□ 1
LDB1-202ENST00000425280 SIGLEC9Q9Y336 463 aa21.28■■□□□ 1
LDB1-202ENST00000425280 UBR5O95071 2799 aaPredicted RBP21.28■■□□□ 1
LDB1-202ENST00000425280 SFTA3P0C7M3 94 aa21.28■■□□□ 1
LDB1-202ENST00000425280 PEA15Q15121 130 aa21.28■■□□□ 1
LDB1-202ENST00000425280 CFHR4Q92496 578 aa21.28■■□□□ 1
LDB1-202ENST00000425280 PBDC1Q9BVG4 233 aa21.28■■□□□ 1
LDB1-202ENST00000425280 MPDU1O75352 247 aa21.27■■□□□ 1
LDB1-202ENST00000425280 VENTXO95231 258 aa21.27■■□□□ 1
LDB1-202ENST00000425280 ATP5J2P56134 94 aa21.27■■□□□ 1
LDB1-202ENST00000425280 ERHP84090 104 aaKnown RBP21.27■■□□□ 1
LDB1-202ENST00000425280 DEFA5Q01523 94 aa21.27■■□□□ 1
LDB1-202ENST00000425280 WT1-ASQ06250 92 aa21.27■■□□□ 1
LDB1-202ENST00000425280 MMD2Q8IY49 270 aa21.27■■□□□ 1
LDB1-202ENST00000425280 RPP25LQ8N5L8 163 aaKnown RBP21.27■■□□□ 1
LDB1-202ENST00000425280 C10orf105Q8TEF2 133 aa21.27■■□□□ 1
LDB1-202ENST00000425280 C1orf159Q96HA4 380 aa21.27■■□□□ 1
LDB1-202ENST00000425280 RNF5Q99942 180 aa21.27■■□□□ 1
LDB1-202ENST00000425280 NPVFQ9HCQ7 196 aa21.27■■□□□ 1
LDB1-202ENST00000425280 KIAA1456Q9P272 454 aa21.27■■□□□ 1
LDB1-202ENST00000425280 FOXH1O75593 365 aa21.27■□□□□ 0.99
LDB1-202ENST00000425280 HABP2Q14520 560 aaPredicted RBP21.27■□□□□ 0.99
LDB1-202ENST00000425280 MGST2Q99735 147 aa21.27■□□□□ 0.99
LDB1-202ENST00000425280 SEC11CQ9BY50 192 aa21.27■□□□□ 0.99
LDB1-202ENST00000425280 METTL1Q9UBP6 276 aaKnown RBP21.27■□□□□ 0.99
LDB1-202ENST00000425280 CARHSP1Q9Y2V2 147 aaKnown RBP21.27■□□□□ 0.99
LDB1-202ENST00000425280 TOX4O94842 621 aa21.26■□□□□ 0.99
LDB1-202ENST00000425280 COX6B1P14854 86 aa21.26■□□□□ 0.99
LDB1-202ENST00000425280 PAX6P26367 422 aa21.26■□□□□ 0.99
LDB1-202ENST00000425280 LCN15Q6UWW0 184 aa21.26■□□□□ 0.99
LDB1-202ENST00000425280 LSM4Q9Y4Z0 139 aaKnown RBP21.26■□□□□ 0.99
LDB1-202ENST00000425280 A1L4Q6 167 aa21.25■□□□□ 0.99
LDB1-202ENST00000425280 MBP02144 154 aa21.25■□□□□ 0.99
LDB1-202ENST00000425280 TBX15Q96SF7 602 aa21.25■□□□□ 0.99
LDB1-202ENST00000425280 MED13LQ71F56 2210 aa21.25■□□□□ 0.99
LDB1-202ENST00000425280 ATRAIDQ6UW56 229 aa21.25■□□□□ 0.99
LDB1-202ENST00000425280 RARRES2Q99969 163 aa21.25■□□□□ 0.99
LDB1-202ENST00000425280 RBFOX3A6NFN3 312 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 VWC2LB2RUY7 222 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 FNDC10F2Z333 226 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 NDUFS8O00217 210 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 OR10G4Q8NGN3 311 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 OR10G9Q8NGN4 311 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 OR10G7Q8NGN6 311 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 TNXAQ16473 311 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 GUCA2BQ16661 112 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 MINOS1Q5TGZ0 78 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 ZNF787Q6DD87 383 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 CLEC2AQ6UVW9 174 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 PPP1R27Q86WC6 154 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 DYNAPQ8N1N2 210 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 FBXL15Q9H469 300 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 POLR3KQ9Y2Y1 108 aaPredicted RBP21.24■□□□□ 0.99
LDB1-202ENST00000425280 MINOS1-NBL1R4GNA1 71 aa21.24■□□□□ 0.99
LDB1-202ENST00000425280 IGHV4-61A0A0C4DH41 118 aa21.23■□□□□ 0.99
LDB1-202ENST00000425280 MAS1LP35410 378 aa21.23■□□□□ 0.99
LDB1-202ENST00000425280 PPT1P50897 306 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms