RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 PSG4Q00888 419 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 H2BFWTQ7Z2G1 175 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ZAR1Q86SH2 424 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 OR13H1Q8NG92 308 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 EIF4EBP2Q13542 120 aaPredicted RBP2.89□□□□□ -1.95
SYNE1-212ENST00000423061 Q6ZSR6 202 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 PP6455Q8WZ26 134 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ZFAND5O76080 213 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SLC25A5P05141 298 aaKnown RBP2.89□□□□□ -1.95
SYNE1-212ENST00000423061 RPL13AP40429 203 aaKnown RBP2.89□□□□□ -1.95
SYNE1-212ENST00000423061 PBOV1Q9GZY1 135 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 B4GALT1P15291 398 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TCTEX1D4Q5JR98 221 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 WNK2Q9Y3S1 2297 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 INSL3P51460 131 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 LGALS4P56470 323 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 PTPRDP23468 1912 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 LRRC30A6NM36 301 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ANKRD37Q7Z713 158 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CREBBPQ92793 2442 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 SCN5AQ14524 2016 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TRAV2A0A0B4J234 112 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 RHOBP62745 196 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 FGF11Q92914 225 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 DNAJB12Q9NXW2 375 aaKnown RBP2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF732B4DXR9 585 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM250H0YL14 139 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CDAP32320 146 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TIMP3P35625 211 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TCF24Q7RTU0 167 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 M0R135 149 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 RER1O15258 196 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 KLKB1P03952 638 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 FSTP19883 344 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF415Q09FC8 603 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 C9orf153Q5TBE3 101 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 PIGCQ92535 297 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF799Q96GE5 643 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 TXNIPQ9H3M7 391 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 WDR90Q96KV7 1748 aa2.89□□□□□ -1.95
SYNE1-212ENST00000423061 CTXND1A0A1B0GTU2 59 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 PRR33A8MZF0 331 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 OPRK1P41145 380 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 PRSS12P56730 875 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF56Q15929 161 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 KIR2DL4Q99706 377 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 CACNA1HO95180 2353 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 HSPE1P61604 102 aaKnown RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 AREGP15514 252 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF141Q15928 474 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 FOXH1O75593 365 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 FCN3O75636 299 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 AAED1Q7RTV5 226 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF525Q8N782 197 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TNFRSF19Q9NS68 423 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 RABAC1Q9UI14 185 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 A8MWV9 139 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 RSPO4Q2I0M5 234 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C1QL2Q7Z5L3 287 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 OR4X2Q8NGF9 303 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 RCHY1Q96PM5 261 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 CDX2Q99626 313 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF256Q9Y2P7 627 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 PTRH2Q9Y3E5 179 aaKnown RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C9JAW5 83 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 NDUFV3P56181 108 aaKnown RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 HIGD1AQ9Y241 93 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TSPAN13O95857 204 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 SPINK2P20155 84 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 RNF144BQ7Z419 303 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 NAT6Q93015 286 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 KIAA2026Q5HYC2 2103 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 IGHV3-64DA0A0J9YX35 117 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 IL4P05112 153 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 EBLN2Q6P2I7 272 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 LTBP1Q14766 1721 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 K7ESM1 405 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 RUNX3Q13761 415 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TAF15Q92804 592 aaKnown RBP eCLIP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 OOEPA6NGQ2 149 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 CRYM-AS1A6NIL9 109 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 A8MWL6 223 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 SRD5A2P31213 254 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 SDF2Q99470 211 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TNS1Q9HBL0 1735 aaKnown RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TRAV8-4A0A0B4J246 113 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1W2PQF6 199 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 SSR4P51571 173 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 SEC61GP60059 68 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C17orf99Q6UX52 265 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 EP300Q09472 2414 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 PLXNA3P51805 1871 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1B0GX78 115 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 DNPH1O43598 174 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 EDDM3AQ14507 147 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM52BQ4KMG9 183 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 PCP2Q8IVA1 136 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 ZDHHC23Q8IYP9 409 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 KMT2EQ8IZD2 1858 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 H3BNC9 293 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms