RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 GSKIPQ9P0R6 139 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 STAB1Q9NY15 2570 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 IGLC7A0M8Q6 106 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 REG1AP05451 166 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 TRAPPC2P0DI81 140 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 TRAPPC2BP0DI82 140 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 CRIP2P52943 208 aaPredicted RBP12.34□□□□□ -0.43
DDX55-203ENST00000421670 PRCDQ00LT1 54 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
DDX55-203ENST00000421670 C11orf87Q6NUJ2 197 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 UNQ5815/PRO19632Q6UWF5 114 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 GSG1LQ6UXU4 331 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 Q6ZNX1 250 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 C19orf35Q6ZS72 473 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 ZNF329Q86UD4 541 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 ZBTB8BQ8NAP8 495 aaPredicted RBP12.34□□□□□ -0.43
DDX55-203ENST00000421670 MED28Q9H204 178 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 RNF114Q9Y508 228 aa12.34□□□□□ -0.43
DDX55-203ENST00000421670 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 CXCL3P19876 107 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 H2BFSP57053 126 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 WT1-ASQ06250 92 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 TNFRSF9Q07011 255 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 FCN2Q15485 313 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 KLHDC1Q8N7A1 406 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 OR11H7Q8NGC8 314 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 OR4D5Q8NGN0 318 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 C19orf24Q9BVV8 132 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.44
DDX55-203ENST00000421670 A0A1W2PN81 502 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 CLPSL1A2RUU4 121 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 HAX1O00165 279 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 SOX15O60248 233 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 CHRNA7P36544 502 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 HOXA1P49639 335 aaPredicted RBP12.32□□□□□ -0.44
DDX55-203ENST00000421670 SPCS3P61009 180 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 RRAS2P62070 204 aaPredicted RBP12.32□□□□□ -0.44
DDX55-203ENST00000421670 CFHR3Q02985 330 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 AKIRIN2Q53H80 203 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 C2orf50Q96LR7 162 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 WNT10AQ9GZT5 417 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 MAGT1Q9H0U3 335 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 PLEKHA3Q9HB20 300 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 ZNF580Q9UK33 172 aa12.32□□□□□ -0.44
DDX55-203ENST00000421670 hCG_2014768A0A024R1R8 64 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 PSMB11A5LHX3 300 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 CEBPZOSA8MTT3 80 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 OR13C7P0DN81 318 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 PROK1P58294 105 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
DDX55-203ENST00000421670 OR5T1Q8NG75 326 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 OR52E5Q8NH55 327 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 WDR89Q96FK6 387 aaPredicted RBP12.31□□□□□ -0.44
DDX55-203ENST00000421670 RBKSQ9H477 322 aa12.31□□□□□ -0.44
DDX55-203ENST00000421670 PPIFP30405 207 aaKnown RBP12.3□□□□□ -0.44
DDX55-203ENST00000421670 NKX2-1P43699 371 aaPredicted RBP12.3□□□□□ -0.44
DDX55-203ENST00000421670 FOXL1Q12952 345 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 PDLIM3Q53GG5 364 aaPredicted RBP12.3□□□□□ -0.44
DDX55-203ENST00000421670 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
DDX55-203ENST00000421670 A0A1B0GVG6 124 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 TMEM89A2RUT3 159 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 FAM90A26D6RGX4 464 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 MBPP02686 304 aaPredicted RBP12.3□□□□□ -0.44
DDX55-203ENST00000421670 PRH1P02810 166 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 IAPPP10997 89 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 POLR2GP62487 172 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDX55-203ENST00000421670 AWAT1Q58HT5 328 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 HIST2H2BDQ6DRA6 164 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 FAM110DQ8TAY7 271 aaPredicted RBP12.3□□□□□ -0.44
DDX55-203ENST00000421670 DTD1Q8TEA8 209 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 GON7Q9BXV9 100 aa12.3□□□□□ -0.44
DDX55-203ENST00000421670 SSSCA1O60232 199 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 CTRB1P17538 263 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 PSMB6P28072 239 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 SLC35B1P78383 322 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 DEFA5Q01523 94 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 ID3Q02535 119 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 CTRB2Q6GPI1 263 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 TTC9CQ8N5M4 171 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 WIPF2Q8TF74 440 aaPredicted RBP12.29□□□□□ -0.44
DDX55-203ENST00000421670 TMEM158Q8WZ71 300 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
DDX55-203ENST00000421670 ENY2Q9NPA8 101 aa12.29□□□□□ -0.44
DDX55-203ENST00000421670 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
DDX55-203ENST00000421670 A0A1B0GUS0 222 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 NPIPB5A8MRT5 1133 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 SYNGR2O43760 224 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 FBXO24O75426 580 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 IGLV1-40P01703 118 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 IGHG4P01861 327 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 RIPPLY3P57055 190 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 S100A10P60903 97 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 RAB32Q13637 225 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 LRRC37A5PQ49AS3 106 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 HSD17B13Q7Z5P4 300 aaPredicted RBP12.28□□□□□ -0.44
DDX55-203ENST00000421670 OR2C3Q8N628 320 aa12.28□□□□□ -0.44
DDX55-203ENST00000421670 C11orf44Q8N8P7 122 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms