RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 APCSP02743 223 aa13.78□□□□□ -0.2
PKP4-204ENST00000421462 SLAQ13239 276 aa13.78□□□□□ -0.2
PKP4-204ENST00000421462 FAM168AQ92567 244 aa13.78□□□□□ -0.2
PKP4-204ENST00000421462 COX11Q9Y6N1 276 aa13.78□□□□□ -0.2
PKP4-204ENST00000421462 M0R2Z0 102 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 EPHA8P29322 1005 aaPredicted RBP13.77□□□□□ -0.2
PKP4-204ENST00000421462 TNXAQ16473 311 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 FBLN7Q53RD9 439 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 GCNT2Q8N0V5 402 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 SLC24A4Q8NFF2 622 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 COQ2Q96H96 371 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 LOXL4Q96JB6 756 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 SGK494Q96LW2 274 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 LOXL2Q9Y4K0 774 aa13.77□□□□□ -0.2
PKP4-204ENST00000421462 LOC105371242A0A075B767 164 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 OOEPA6NGQ2 149 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 SRFP11831 508 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 CLDN18P56856 261 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 OR1C1Q15619 314 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 IBA57Q5T440 356 aaKnown RBP13.77□□□□□ -0.21
PKP4-204ENST00000421462 DCAF12Q5T6F0 453 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 ORAOV1Q8WV07 137 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 ZNF331Q9NQX6 463 aaPredicted RBP13.77□□□□□ -0.21
PKP4-204ENST00000421462 CLEC5AQ9NY25 188 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 CER1O95813 267 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 CX3CL1P78423 397 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 SAPCD1Q5SSQ6 148 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 HES3Q5TGS1 186 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 LYSMD4Q5XG99 296 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 LINC00696Q6ZRV3 163 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 ZNF439Q8NDP4 499 aa13.77□□□□□ -0.21
PKP4-204ENST00000421462 MUC3AQ02505 3323 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 SH2D7A6NKC9 451 aaPredicted RBP13.76□□□□□ -0.21
PKP4-204ENST00000421462 MT-CO2P00403 227 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 CD24P25063 80 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 ERVK-16P61578 105 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 RPL8P62917 257 aaKnown RBP13.76□□□□□ -0.21
PKP4-204ENST00000421462 RPL19P84098 196 aaKnown RBP13.76□□□□□ -0.21
PKP4-204ENST00000421462 ZBTB34Q8NCN2 500 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 SLC25A40Q8TBP6 338 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 MCRIP2Q9BUT9 160 aaKnown RBP13.76□□□□□ -0.21
PKP4-204ENST00000421462 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 LOC400499M0QZD8 3231 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 DYSFO75923 2080 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 A0A1W2PN81 502 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 ZC2HC1AQ96GY0 325 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 GP6Q9HCN6 339 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 NPVFQ9HCQ7 196 aa13.76□□□□□ -0.21
PKP4-204ENST00000421462 GFRA3O60609 400 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 IGLL1P15814 213 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 MFAP2P55001 183 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 PLGLB1Q02325 96 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 WDR73Q6P4I2 378 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 KIR3DL3Q8N743 410 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 Q8TCH9 128 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 DUSP23Q9BVJ7 150 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 ARL2-SNX15V9GYD0 113 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 ROS1P08922 2347 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 GAL3ST2Q9H3Q3 398 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 TRGV10A0A0A0MS01 117 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 ZNF146Q15072 292 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 TMEM45BQ96B21 275 aa13.75□□□□□ -0.21
PKP4-204ENST00000421462 SS18L1O75177 396 aaPredicted RBP13.74□□□□□ -0.21
PKP4-204ENST00000421462 MPDU1O75352 247 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 PROP1O75360 226 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 ERVK11-1P61568 191 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 LDLRAD2Q5SZI1 272 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 Q8IYB0 196 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 C1orf159Q96HA4 380 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 TCF19Q9Y242 345 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 WASHC3Q9Y3C0 194 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 AMY1AP04745 511 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 MLANAQ16655 118 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 OR10J3Q5JRS4 329 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 TXNDC17Q9BRA2 123 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 TMEM140Q9NV12 185 aa13.74□□□□□ -0.21
PKP4-204ENST00000421462 BOKQ9UMX3 212 aaPredicted RBP13.74□□□□□ -0.21
PKP4-204ENST00000421462 EIF4EBP1Q13541 118 aaPredicted RBP13.73□□□□□ -0.21
PKP4-204ENST00000421462 IL11RAQ14626 422 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 EBLN2Q6P2I7 272 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 TRAT1Q6PIZ9 186 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 PPP1R32Q7Z5V6 425 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 ZNF596Q8TC21 504 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 C18orf32Q8TCD1 76 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 MT-ND6P03923 174 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 TNFSF4P23510 183 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 RAB31Q13636 194 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 TBC1D28Q2M2D7 210 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 CDX2Q99626 313 aaPredicted RBP13.73□□□□□ -0.21
PKP4-204ENST00000421462 IL19Q9UHD0 177 aa13.73□□□□□ -0.21
PKP4-204ENST00000421462 LYZL6O75951 148 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 DUTP33316 252 aaKnown RBP13.72□□□□□ -0.21
PKP4-204ENST00000421462 MPV17P39210 176 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 FABP6P51161 128 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 DUSP3P51452 185 aaPredicted RBP13.72□□□□□ -0.21
PKP4-204ENST00000421462 FOXA3P55318 350 aaPredicted RBP13.72□□□□□ -0.21
PKP4-204ENST00000421462 UTF1Q5T230 341 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms