RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 HIST1H1BP16401 226 aaKnown RBP5.97□□□□□ -1.45
VIM-202ENST00000421459 MYL9P24844 172 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 PTBP1P26599 531 aaKnown RBP eCLIP5.97□□□□□ -1.45
VIM-202ENST00000421459 FCGR2CP31995 323 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 TFPI2P48307 235 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 APOC4P55056 127 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 GNG2P59768 71 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 WT1-ASQ06250 92 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 NEDD8Q15843 81 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 SLC25A24Q6NUK1 477 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 ZNF66Q6ZN08 573 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 ZNF367Q7RTV3 350 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 SLC38A6Q8IZM9 456 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 STPG3Q8N7X2 389 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 CXorf58Q96LI9 332 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 C20orf24Q9BUV8 137 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 C5orf66Q9H5L9 145 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 BET1LQ9NYM9 111 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 DAPK2Q9UIK4 370 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 TP53TG1Q9Y2A0 90 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 KLK5Q9Y337 293 aaPredicted RBP5.97□□□□□ -1.45
VIM-202ENST00000421459 UFC1Q9Y3C8 167 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 DNAH11Q96DT5 4516 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 PKD1P98161 4303 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 TEX50A0A1B0GTY4 177 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 TRDV1A0A1B0GX56 115 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 F8W735 103 aaPredicted RBP5.96□□□□□ -1.46
VIM-202ENST00000421459 ZNF701M0R085 212 aaPredicted RBP5.96□□□□□ -1.46
VIM-202ENST00000421459 SLC22A5O76082 557 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 CLEC2LP0C7M8 214 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 OR13C7P0DN81 318 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 GALP22466 123 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 ADMP35318 185 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 FXYD4P59646 89 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 ZNF818PQ6ZRF7 136 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 GPR141Q7Z602 305 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 UBAC2Q8NBM4 344 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 OR5H6Q8NGV6 325 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 OR51H1Q8NH63 302 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 LGALS14Q8TCE9 139 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 TMEM190Q8WZ59 177 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 MARC2Q969Z3 335 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 SPAG8Q99932 426 aaPredicted RBP5.96□□□□□ -1.46
VIM-202ENST00000421459 DCSTAMPQ9H295 470 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 RNF167Q9H6Y7 350 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 MAP6D1Q9H9H5 199 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 TMEM140Q9NV12 185 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 NDUFB11Q9NX14 153 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 FBXL17Q9UF56 701 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 NSG2Q9Y328 171 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 PKHD1P08F94 4074 aa5.96□□□□□ -1.46
VIM-202ENST00000421459 TRAV18A0A075B6X5 111 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 IGHV3OR16-13A0A075B7E8 117 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 IGHV3-74A0A0B4J1X5 117 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 MEIS3P1A6NDR6 274 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 NOTOA8MTQ0 251 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 UBE2CO00762 179 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 PPYP01298 95 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 IGHV3-48P01763 117 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 SERPINE2P07093 398 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 ELLP55199 621 aaPredicted RBP5.95□□□□□ -1.46
VIM-202ENST00000421459 ARPC4P59998 168 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 LGALS9CQ6DKI2 356 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 LAMTOR1Q6IAA8 161 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 GBGT1Q8N5D6 347 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 BEST4Q8NFU0 473 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 DMBX1Q8NFW5 382 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 OR4A5Q8NH83 315 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 CD300LFQ8TDQ1 290 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 SCARB1Q8WTV0 552 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 YIPF6Q96EC8 236 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 RNF2Q99496 336 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 BCL7BQ9BQE9 202 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 CENPOQ9BU64 300 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 HINT2Q9BX68 163 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 QTRT1Q9BXR0 403 aaKnown RBP5.95□□□□□ -1.46
VIM-202ENST00000421459 COMMD5Q9GZQ3 224 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 SLC5A7Q9GZV3 580 aa5.95□□□□□ -1.46
VIM-202ENST00000421459 TXNL4BQ9NX01 149 aaKnown RBP5.95□□□□□ -1.46
VIM-202ENST00000421459 KIR2DL5BA0A0G2JN68 375 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 KIR2DL5BA0A0G2JPC4 375 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 DBX1A6NMT0 343 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 K7EIM0 57 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 GABARAPO95166 117 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 HPRT1P00492 218 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 TRAPPC2P0DI81 140 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 TRAPPC2BP0DI82 140 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 NQO2P16083 231 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 PSMB9P28065 219 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 RANBP1P43487 201 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 TMBIM6P55061 237 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 TAS2R31P59538 309 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 MXD1Q05195 221 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 Q56UQ5 140 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 TMEM17Q86X19 198 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 KIR2DL5AQ8N109 375 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 LILRB2Q8N423 598 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 GDPD1Q8N9F7 314 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 OR11H2Q8NH07 326 aa5.94□□□□□ -1.46
VIM-202ENST00000421459 KIR2DL5BQ8NHK3 375 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms