RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 NABP2Q9BQ15 211 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 C20orf24Q9BUV8 137 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SDF2L1Q9HCN8 221 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 MIOXQ9UGB7 285 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 LAMA5O15230 3695 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 DLL1O00548 723 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 IGHV2-70P01814 119 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 AGAP20933 346 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 GPX4P36969 197 aaPredicted RBP11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TMEM144Q7Z5S9 345 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ABHD12Q8N2K0 398 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RNASEH2CQ8TDP1 164 aaKnown RBP11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 NEU4Q8WWR8 484 aaPredicted RBP11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 MGST2Q99735 147 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SSX3Q99909 188 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SMIM7Q9BQ49 75 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CHODLQ9H9P2 273 aa11.85□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CLDN34H7C241 214 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CA2P00918 260 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 OPN1MWP04001 364 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 OPN1MW2P0DN77 364 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 OPN1MW3P0DN78 364 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RND2P52198 227 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CEBPGP53567 150 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CD81P60033 236 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 B2MP61769 119 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ADORA2A-AS1P86434 159 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 WDR25Q64LD2 544 aaPredicted RBP11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 OR8B3Q8NGG8 313 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 OR8B2Q96RD0 313 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RNF2Q99496 336 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RNF5Q99942 180 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 NDUFA4L2Q9NRX3 87 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CBLN4Q9NTU7 201 aa11.84□□□□□ -0.51
HLA-DPA1-242ENST00000419277 UTF1Q5T230 341 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 LYPD2Q6UXB3 125 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 BTF3L4Q96K17 158 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TEX50A0A1B0GTY4 177 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ATXN7O15265 892 aaPredicted RBP11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 CLN5O75503 358 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 FCN3O75636 299 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 COMPP49747 757 aaPredicted RBP11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TMEM241Q24JQ0 296 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SMUG1Q53HV7 270 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ARSJQ5FYB0 599 aaPredicted RBP11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 LINC01560Q8TB33 94 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 CLEC7AQ9BXN2 247 aa11.83□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PKDREJQ9NTG1 2253 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 IGLV1-47P01700 117 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 S100A6P06703 90 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 CD99P14209 185 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ERVFRD-1P60508 538 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PRR20EP86478 221 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PRR20CP86479 221 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PRR20DP86480 221 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PRR20BP86481 221 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PRR20AP86496 221 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 FAM24BQ8N5W8 94 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TEX45Q8NA69 505 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 DOK5Q9P104 306 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SRRM4A7MD48 611 aaKnown RBP11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 YIF1AO95070 293 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ROS1P08922 2347 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 AKR1C3P42330 323 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 CD69Q07108 199 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ETFRF1Q6IPR1 90 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SPNS3Q6ZMD2 512 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 MMD2Q8IY49 270 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 STPG3Q8N7X2 389 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ISOC2Q96AB3 205 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TCEAL7Q9BRU2 100 aa11.81□□□□□ -0.52
HLA-DPA1-242ENST00000419277 IGHV2-26A0A0B4J1V2 119 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 CORTO00230 105 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 LIPFP07098 398 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 FBP1P09467 338 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 RNASE2P10153 161 aaKnown RBP11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TAS2R45P59539 299 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 RPS16P62249 146 aaKnown RBP11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PAX2Q02962 417 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 HABP2Q14520 560 aaPredicted RBP11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ELOBQ15370 118 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ZNF841Q6ZN19 808 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 DTX2Q86UW9 622 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 OR4F5Q8NH21 305 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 OR4F4Q96R69 305 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 HINT2Q9BX68 163 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 MRPL32Q9BYC8 188 aaKnown RBP11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TMEM167BQ9NRX6 74 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 IGF2RP11717 2491 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TRBV24-1A0A075B6N3 115 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SIAH2O43255 324 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms