RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 RHOGP84095 191 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 PCOLCEQ15113 449 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 OR8B2Q96RD0 313 aa12.24□□□□□ -0.45
NCKIPSD-204ENST00000416649 SPENQ96T58 3664 aaKnown RBP12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 CCL3P10147 92 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 PSG9Q00887 426 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 FADS6Q8N9I5 356 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 RAB1CQ92928 201 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 CHCHD2Q9Y6H1 151 aaPredicted RBP12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 NGFP01138 241 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 RAC2P15153 192 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 GATA2P23769 480 aaPredicted RBP12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 NPY1RP25929 384 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 PCBD1P61457 104 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 OR2T6Q8NHC8 308 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 CPT1CQ8TCG5 803 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 SARAFQ96BY9 339 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 SMIM12Q96EX1 92 aa12.23□□□□□ -0.45
NCKIPSD-204ENST00000416649 SH2D7A6NKC9 451 aaPredicted RBP12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 CXCL13O43927 109 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 RPL8P62917 257 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 ARG2P78540 354 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 TIGITQ495A1 244 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 SPATA12Q7Z6I5 190 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 S100A7AQ86SG5 101 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 ABHD3Q8WU67 409 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 MS4A5Q9H3V2 200 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 HEYLQ9NQ87 328 aaPredicted RBP12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 MED12LQ86YW9 2145 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 ZNF318Q5VUA4 2279 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 OR4C46A6NHA9 309 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 GOSR1O95249 250 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 FKBP2P26885 142 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 FOLR3P41439 243 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 ZNF718Q3SXZ3 478 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 TREML4Q6UXN2 200 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 TXNDC17Q9BRA2 123 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 MCRIP2Q9BUT9 160 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 SSBP4Q9BWG4 385 aaPredicted RBP12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 FAM234AQ9H0X4 552 aa12.22□□□□□ -0.45
NCKIPSD-204ENST00000416649 IGHV1-45A0A0A0MS14 117 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 HSBP1L1C9JCN9 74 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 NEURL1O76050 574 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 LINC00869P0C866 280 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 COX6A1P12074 109 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 RNF138Q8WVD3 245 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 PLPPR2Q96GM1 343 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 MGST2Q99735 147 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 A0A0G2JMM0 328 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 A0A1W2PPB8 328 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 KIR3DP1A8MWS1 328 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 ZIC3O60481 467 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 CAMPP49913 170 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 RHOBP62745 196 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 VWC2Q2TAL6 325 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 BVES-AS1Q5T3Y7 98 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 GGTLC1Q9BX51 225 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 C1QTNF5Q9BXJ0 243 aa12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 CHTOPQ9Y3Y2 248 aaKnown RBP12.21□□□□□ -0.45
NCKIPSD-204ENST00000416649 H0YJW9 148 aa12.21□□□□□ -0.46
NCKIPSD-204ENST00000416649 CATR1Q13166 79 aa12.21□□□□□ -0.46
NCKIPSD-204ENST00000416649 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.46
NCKIPSD-204ENST00000416649 PEAR1Q5VY43 1037 aaPredicted RBP12.21□□□□□ -0.46
NCKIPSD-204ENST00000416649 CHODLQ9H9P2 273 aa12.21□□□□□ -0.46
NCKIPSD-204ENST00000416649 ZNF292O60281 2723 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 ARFGEF3Q5TH69 2177 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 CDX4O14627 284 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 SNAI2O43623 268 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 MFAP2P55001 183 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 PSG5Q15238 335 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 GABRA6Q16445 453 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 SPATA46Q5T0L3 261 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 A0A087X0K7 114 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 A0A1W2PNU3 283 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 CEBPDP49716 269 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 ABHD12Q8N2K0 398 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
NCKIPSD-204ENST00000416649 CADP27708 2225 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 TRGV10A0A0A0MS01 117 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 IGHV3-43A0A0B4J1X8 118 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 CORTO00230 105 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 MT-CO2P00403 227 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 IGHV3-43DP0DP04 118 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 OPRK1P41145 380 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 FOXG1P55316 489 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 LTC4SQ16873 150 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 SLC25A34Q6PIV7 304 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 RPS19BP1Q86WX3 136 aaKnown RBP12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 MRPL27Q9P0M9 148 aaKnown RBP12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 KMT2EQ8IZD2 1858 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 C9JCJ5 164 aa12.19□□□□□ -0.46
NCKIPSD-204ENST00000416649 OR2H2O95918 312 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms