RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CIARTQ8N365 385 aaPredicted RBP11.39□□□□□ -0.59
HMGA1P1-201ENST00000415560 LILRB2Q8N423 598 aa11.39□□□□□ -0.59
HMGA1P1-201ENST00000415560 OR5C1Q8NGR4 320 aa11.39□□□□□ -0.59
HMGA1P1-201ENST00000415560 SRSF8Q9BRL6 282 aaKnown RBP11.39□□□□□ -0.59
HMGA1P1-201ENST00000415560 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
HMGA1P1-201ENST00000415560 FBXL17Q9UF56 701 aa11.39□□□□□ -0.59
HMGA1P1-201ENST00000415560 BAHCC1Q9P281 2608 aa11.39□□□□□ -0.59
HMGA1P1-201ENST00000415560 PRRC2AP48634 2157 aaKnown RBP11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 TSPAN9O75954 239 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 CA2P00918 260 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 IFNA5P01569 189 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 MYOD1P15172 320 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 TMEM267Q0VDI3 215 aaPredicted RBP11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 PJVKQ0ZLH3 352 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 EIF5AL1Q6IS14 154 aaKnown RBP11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 TEX261Q6UWH6 196 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 CLEC9AQ6UXN8 241 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 ZNF562Q6V9R5 426 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 TMEM217Q8N7C4 229 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 SLC24A4Q8NFF2 622 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 RBM14Q96PK6 669 aaKnown RBP11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 TPSG1Q9NRR2 321 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 APCP25054 2843 aa11.38□□□□□ -0.59
HMGA1P1-201ENST00000415560 TACC2O95359 2948 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 BTBD17A6NE02 478 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 M0QZK8 103 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 FGF16O43320 207 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 FSHBP01225 129 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 IFNA4P05014 189 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 HNF1AP20823 631 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 NPY1RP25929 384 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 FXYD3Q14802 87 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 MRGPRG-AS1Q2M3A8 158 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 C2orf83Q53S99 150 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 SLC25A24Q6NUK1 477 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 ETV3LQ6ZN32 361 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 C16orf82Q7Z2V1 217 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 BAP18Q8IXM2 172 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 STPG2Q8N412 459 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 OR5R1Q8NH85 324 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 SRSF12Q8WXF0 261 aaKnown RBP11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 ST8SIA2Q92186 375 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 OR4C12Q96R67 309 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 ATP5SQ99766 215 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 SLC25A33Q9BSK2 321 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 MOB4Q9Y3A3 225 aa11.37□□□□□ -0.59
HMGA1P1-201ENST00000415560 H3BUX3 64 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 FCN1O00602 326 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 OR13C7P0DN81 318 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 IFITM2Q01629 132 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 SLC38A11Q08AI6 406 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 DEFB112Q30KQ8 113 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 Q8N9W7 124 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 UBAC2Q8NBM4 344 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 STOML3Q8TAV4 291 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 SCGB1C1Q8TD33 95 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 ABHD5Q8WTS1 349 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 PHYHIPLQ96FC7 376 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 GGACTQ9BVM4 153 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 YAE1D1Q9NRH1 226 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 CYTL1Q9NRR1 136 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 UBQLN2Q9UHD9 624 aa11.36□□□□□ -0.59
HMGA1P1-201ENST00000415560 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 FASNP49327 2511 aaKnown RBP11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 C15orf62A8K5M9 175 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 RGS13O14921 159 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 CYB5BO43169 146 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 SRP14P37108 136 aaKnown RBP11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 SCGB2A2Q13296 93 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 CLINT1Q14677 625 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 SPNS3Q6ZMD2 512 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 ZNF680Q8NEM1 530 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 OR10W1Q8NGF6 305 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 OR1L6Q8NGR2 347 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 PIFOQ8TCI5 191 aa11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 BSCL2Q96G97 398 aaPredicted RBP11.35□□□□□ -0.59
HMGA1P1-201ENST00000415560 A6NDX4 124 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 PMS2P5A8MQ11 134 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 E7EUB6 86 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 RAB14P61106 215 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 CX3CL1P78423 397 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 BCL6BQ8N143 479 aaPredicted RBP11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 SSMEM1Q8WWF3 244 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 ARPC1AQ92747 370 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 TMEM68Q96MH6 324 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 TMEM147Q9BVK8 224 aa11.34□□□□□ -0.59
HMGA1P1-201ENST00000415560 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 CORTO00230 105 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 RNASE2P10153 161 aaKnown RBP11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 IER3P46695 156 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 DLK1P80370 383 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 WT1-ASQ06250 92 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 EXOSC2Q13868 293 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms