RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 FRMD6-AS1P0C7T7 363 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 IGFBP6P24592 240 aaPredicted RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 RPL27P61353 136 aaKnown RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 RPS16P62249 146 aaKnown RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 ZNF726P1Q15940 193 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 NMSQ5H8A3 153 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 C6orf226Q5I0X4 101 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 OTPQ5XKR4 325 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 SLC48A1Q6P1K1 146 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 GAPTQ8N292 157 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 TTTY10Q9BZA0 68 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 ABT1Q9ULW3 272 aaKnown RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 MPC1Q9Y5U8 109 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 POLR2AP24928 1970 aaKnown RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 CEBPZOSA8MTT3 80 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 ZG16O60844 167 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 VSIG8P0DPA2 414 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 CX3CL1P78423 397 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 SERF2P84101 59 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 EFEMP1Q12805 493 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 LCN10Q6JVE6 187 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 KLHDC9Q8NEP7 349 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 OR6K6Q8NGW6 343 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 PHLDA1Q8WV24 401 aaPredicted RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 TMEM171Q8WVE6 324 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 NKD1Q969G9 470 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 CNRIP1Q96F85 164 aaPredicted RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 C21orf62Q9NYP8 219 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 TAS2R4Q9NYW5 299 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 MPIG6BO95866 241 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 TIMP1P01033 207 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 MALLQ13021 153 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 ZNF74Q16587 644 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 SPRNQ5BIV9 151 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 FHL5Q5TD97 284 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 RSPO2Q6UXX9 243 aaPredicted RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 RFLNAQ6ZTI6 216 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 TMEM219Q86XT9 240 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 SLC22A24Q8N4F4 322 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 OR1F12Q8NHA8 337 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 CLDN23Q96B33 292 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 C1orf147Q96MC9 270 aaPredicted RBP4.33□□□□□ -1.72
HERC4-205ENST00000412272 NMNAT3Q96T66 252 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 RASL11BQ9BPW5 248 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 PMCHL2Q9BQD1 86 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 KXD1Q9BQD3 176 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 NAA60Q9H7X0 242 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 TIMM9Q9Y5J7 89 aa4.33□□□□□ -1.72
HERC4-205ENST00000412272 KLK10O43240 276 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 ENSAO43768 121 aaKnown RBP4.32□□□□□ -1.72
HERC4-205ENST00000412272 SLC38A11Q08AI6 406 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 GAGE2BQ13066 116 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 PPP1R32Q7Z5V6 425 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 C8orf44Q96CB5 159 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 RNASE7Q9H1E1 156 aaKnown RBP4.32□□□□□ -1.72
HERC4-205ENST00000412272 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 PRNDQ9UKY0 176 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 ARL2-SNX15V9GYD0 113 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 A0A0A6YYD4 124 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 PRDX2P32119 198 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 CEACAM16Q2WEN9 425 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 TTC32Q5I0X7 151 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 FAM120AOSQ5T036 256 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 IBA57Q5T440 356 aaKnown RBP4.32□□□□□ -1.72
HERC4-205ENST00000412272 MRPL2Q5T653 305 aaKnown RBP4.32□□□□□ -1.72
HERC4-205ENST00000412272 Q6ZS49 121 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 Q6ZS92 163 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 BPIFA4PQ86YQ2 179 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 OR4C13Q8NGP0 309 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 COL4A5P29400 1685 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 TRPM6Q9BX84 2022 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 A0A1W2PR77 199 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 PI3P19957 117 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 OR1D5P58170 312 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 HHEXQ03014 270 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 PRSS41Q7RTY9 318 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 APOOQ9BUR5 198 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 IFI27L2Q9H2X8 130 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 RABAC1Q9UI14 185 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 TMEM131Q92545 1883 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 TRAV4A0A0B4J268 109 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 LRRC30A6NM36 301 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 E9PLD3 99 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 C11orf98E9PRG8 122 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 H3BMG7 143 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 PEBP1P30086 187 aaKnown RBP4.32□□□□□ -1.72
HERC4-205ENST00000412272 FAM27E3Q08E93 113 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 CARD19Q96LW7 228 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 OR2A5Q96R48 311 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 AICDAQ9GZX7 198 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 B9D1Q9UPM9 204 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 R4GMQ9 66 aa4.32□□□□□ -1.72
HERC4-205ENST00000412272 DOCK9Q9BZ29 2069 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 A0A1B0GWA3 101 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 TMEM89A2RUT3 159 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 ACTL6BO94805 426 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 NDUFA7O95182 113 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 OR2H2O95918 312 aa4.31□□□□□ -1.72
HERC4-205ENST00000412272 APOA2P02652 100 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms