RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 A0A087WUU8 490 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 A0A1B0GW54 56 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 M0QZK8 103 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 PIAS1O75925 651 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 OR2J2O76002 312 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 IGKV1-5P01602 117 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 APOA2P02652 100 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 IGHV3-30-3P0DP02 117 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 SLC25A16P16260 332 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 MDKP21741 143 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-204ENST00000412061 RPS4Y1P22090 263 aaKnown RBP2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST1H2BOP23527 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST1H2BBP33778 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 RPL27AP46776 148 aaKnown RBP2.81□□□□□ -1.96
BRCA1-204ENST00000412061 CSN1S1P47710 185 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST1H2BDP58876 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST1H2BCP62807 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 DHRS2Q13268 280 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST2H2BEQ16778 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 LTC4SQ16873 150 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 LINC00483Q53H64 154 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-204ENST00000412061 FNDC9Q8TBE3 224 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF675Q8TD23 568 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 H1FXQ92522 213 aaKnown RBP2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST1H2BHQ93079 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 TCEAL4Q96EI5 215 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 FOPNLQ96NB1 174 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 MGLLQ99685 303 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST1H2BNQ99877 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 HIST1H2BMQ99879 126 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 UPK3BQ9BT76 320 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 CCDC32Q9BV29 185 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 PBOV1Q9GZY1 135 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 SPANXA1Q9NS26 97 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 FUT9Q9Y231 359 aa2.81□□□□□ -1.96
BRCA1-204ENST00000412061 MYH10P35580 1976 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 ZCCHC11Q5TAX3 1644 aaKnown RBP2.8□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF106Q9H2Y7 1883 aaKnown RBP2.8□□□□□ -1.96
BRCA1-204ENST00000412061 TRAV41A0A0B4J266 112 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 H3BQ85 93 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 CCL3P10147 92 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 CRHBPP24387 322 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 GTF2A1P52655 376 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-204ENST00000412061 SCGB2B2Q4G0G5 96 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 LYRM7Q5U5X0 104 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 AADACL3Q5VUY0 350 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 TCF24Q7RTU0 167 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 C3orf22Q8N5N4 141 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF709Q8N972 641 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 ST20-AS1Q8NBB2 130 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 CCDC115Q96NT0 180 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 TTTY13Q9BZ97 58 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 VCXQ9H320 206 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 IL36BQ9NZH7 164 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 MCTS1Q9ULC4 181 aaKnown RBP2.8□□□□□ -1.96
BRCA1-204ENST00000412061 SIPA1L1O43166 1804 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 TUBGCP6Q96RT7 1819 aa2.8□□□□□ -1.96
BRCA1-204ENST00000412061 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.8□□□□□ -1.96
BRCA1-204ENST00000412061 MAST2Q6P0Q8 1798 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 PRRC2AP48634 2157 aaKnown RBP2.79□□□□□ -1.96
BRCA1-204ENST00000412061 IGKV1D-37A0A075B6S9 117 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 ARL5CA6NH57 179 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 BET1O15155 118 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 NDUFB2O95178 105 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 IFNA10P01566 189 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 PRM2P04554 102 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 MUC1P15941 1255 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-204ENST00000412061 SRIP30626 198 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 CA5AP35218 305 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 TAS2R20P59543 309 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 CCL20P78556 96 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 CCDC58Q4VC31 144 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 RPL22L1Q6P5R6 122 aaKnown RBP2.79□□□□□ -1.96
BRCA1-204ENST00000412061 SDIM1Q6ZPB5 146 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 Q6ZQT7 251 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 LYZL2Q7Z4W2 148 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF695Q8IW36 515 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 APCDD1LQ8NCL9 501 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 BPIFB6Q8NFQ5 453 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 OR10D4PQ8NGN7 298 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 OR13C4Q8NGS5 318 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 CYYR1Q96J86 154 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 C2orf50Q96LR7 162 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 TSC22D3Q99576 134 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 MND1Q9BWT6 205 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 JPT1Q9UK76 154 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 FMN1Q68DA7 1419 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 UHRF1BP1Q6BDS2 1440 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 NCOA3Q9Y6Q9 1424 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 CACNA1SQ13698 1873 aa2.79□□□□□ -1.96
BRCA1-204ENST00000412061 NID2Q14112 1375 aa2.78□□□□□ -1.96
BRCA1-204ENST00000412061 C7orf66A4D0T2 115 aa2.78□□□□□ -1.96
BRCA1-204ENST00000412061 GGT3PA6NGU5 568 aa2.78□□□□□ -1.96
BRCA1-204ENST00000412061 TRAPPC2LH3BP13 241 aa2.78□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF73O43830 326 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-204ENST00000412061 CST8O60676 142 aa2.78□□□□□ -1.96
BRCA1-204ENST00000412061 LY6HO94772 140 aa2.78□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF286BP0CG31 522 aa2.78□□□□□ -1.96
BRCA1-204ENST00000412061 BLVRBP30043 206 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms