RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 UPK3BQ9BT76 320 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 ANKRD26Q9UPS8 1709 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 IGHV3-43A0A0B4J1X8 118 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 IGHV3-43DP0DP04 118 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 PYYP10082 97 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 PDLIM4P50479 330 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 SCARF2Q96GP6 870 aaPredicted RBP3.9□□□□□ -1.79
PTPN13-202ENST00000411767 YPEL4Q96NS1 127 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 PXDNLA1KZ92 1463 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 LIPT2A6NK58 231 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 FABP5P3A8MUU1 101 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 E9PQ18 207 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 IL9P15248 144 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 TM4SF1P30408 202 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 COL9A2Q14055 689 aaPredicted RBP3.9□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF826PQ6ZT77 177 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 CYS1Q717R9 158 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 TMEM255BQ8WV15 326 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 NABP1Q96AH0 204 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 SMIM8Q96KF7 97 aa3.9□□□□□ -1.79
PTPN13-202ENST00000411767 H0YIG0 161 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 OVOL1O14753 267 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 Q6ZPB1 254 aaPredicted RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 CYP2G1PQ6ZSU1 146 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 HIST1H2BLQ99880 126 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 MIXL1Q9H2W2 232 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 NPDC1Q9NQX5 325 aaPredicted RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 PTPRMP28827 1452 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 COX7A2LO14548 114 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 TNFSF13O75888 250 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 TMEM240Q5SV17 173 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 LINC01545Q5VT33 79 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF503Q96F45 646 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 RCC1LQ96I51 464 aaKnown RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 R3HDMLQ9H3Y0 253 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 MYH9P35579 1960 aaKnown RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0G2JK05 382 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 ETDCA0A1B0GVM5 59 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 TCRBV7S3A2A0A539 114 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 COL9A1P20849 921 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 UCNP55089 124 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 RPL23P62829 140 aaKnown RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 VGLL4Q14135 290 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 HEPN1Q6WQI6 88 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 IL17RELQ6ZVW7 336 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 BCL6BQ8N143 479 aaPredicted RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 MVB12AQ96EY5 273 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 MYEOVQ96EZ4 313 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 RNF126Q9BV68 326 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 PCM1Q15154 2024 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 TMEM88BA6NKF7 163 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 B9A039 149 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 SNAI2O43623 268 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 ZIC3O60481 467 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 UBE2V1Q13404 147 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF645Q8N7E2 425 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 A0A1W2PNR3 127 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 NPIPB13A6NJU9 1138 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 NPIPB5A8MRT5 1133 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 LINC01619G3V211 115 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 AGFG2O95081 481 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 TRGV3P03979 118 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 CELA3AP09093 270 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 TIMP3P35625 211 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 LSM6P62312 80 aaKnown RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 SUPT4H1P63272 117 aaKnown RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 SPATA46Q5T0L3 261 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 CXorf67Q86X51 503 aaPredicted RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 UMODL1-AS1Q8N2C9 162 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0G2JNJ9 132 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 KLK8O60259 260 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 NANOS2P60321 138 aaKnown RBP3.89□□□□□ -1.79
PTPN13-202ENST00000411767 ZNF329Q86UD4 541 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 SLC25A29Q8N8R3 303 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 ZFP64Q9NPA5 681 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 Q9UFV3 132 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0B4J2C4 111 aa3.89□□□□□ -1.79
PTPN13-202ENST00000411767 A2ML1A8K2U0 1454 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 SPATA31D1Q6ZQQ2 1576 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 RNASE2P10153 161 aaKnown RBP3.88□□□□□ -1.79
PTPN13-202ENST00000411767 FGF12P61328 243 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 FAM219BQ5XKK7 198 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 ST6GALNAC3Q8NDV1 305 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 VN1R2Q8NFZ6 395 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 JPT1Q9UK76 154 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 IGKV1D-42A0A075B6H8 117 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 CXCL13O43927 109 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 IGKV3-20P01619 116 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 CCL3P10147 92 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 FXYD3Q14802 87 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 TXNRD3NBQ6F5E7 133 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 SMIM27A0A1W2PRY6 76 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 VDAC2P45880 294 aaPredicted RBP3.88□□□□□ -1.79
PTPN13-202ENST00000411767 DAPP51397 102 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 RPL31P62899 125 aaKnown RBP3.88□□□□□ -1.79
PTPN13-202ENST00000411767 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
PTPN13-202ENST00000411767 DCAF12L2Q5VW00 463 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 MRPL53Q96EL3 112 aaKnown RBP3.88□□□□□ -1.79
PTPN13-202ENST00000411767 RNF115Q9Y4L5 304 aa3.88□□□□□ -1.79
PTPN13-202ENST00000411767 A0A0U1RRA0 63 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms