RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 GLIPR1P48060 266 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 RPL39P5Q59GN2 51 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 RHOVQ96L33 236 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 RPRMQ9NS64 109 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 C1QCP02747 245 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 LURAP1LQ8IV03 231 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 NPIPB4C9JG80 1138 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 COX6A1P12074 109 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 ZP4Q12836 540 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 PPP1R32Q7Z5V6 425 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 NRIP2Q9BQI9 281 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 ZNF585BQ52M93 769 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 FGFRL1Q8N441 504 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 OR13A1Q8NGR1 328 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 MBD3L1Q8WWY6 194 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 IGHV3-64A0A075B6Q5 118 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 CFDP00746 253 aaPredicted RBP9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 FAM209AQ5JX71 171 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 C1QTNF12Q5T7M4 302 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 TMEM186Q96B77 213 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 IFT22Q9H7X7 185 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 KLHDC2Q9Y2U9 406 aa9.57□□□□□ -0.88
PRPF40A-202ENST00000410080 C1QTNF9BB2RNN3 333 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 M0QZK8 103 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 GGCTO75223 188 aaKnown RBP9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 NPC2P61916 151 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 IGHV3-73A0A0B4J1V6 119 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 TRAV24A0A0B4J272 114 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 ADARB2-AS1A8MUL3 147 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 OR10J3Q5JRS4 329 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 FAM27BQ5VT28 67 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 SAP25Q8TEE9 199 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 TET2Q6N021 2002 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 CD8AP01732 235 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 CRHP06850 196 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 FXYD7P58549 80 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 ERVK11-1P61568 191 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 KIAA1644Q3SXP7 199 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 NPIPB3Q92617 1050 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 TMEM45BQ96B21 275 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 LY75O60449 1722 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 EREGO14944 169 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 TTC9CQ8N5M4 171 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 COL4A5P29400 1685 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 TRAV40A0A0B4J280 105 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 APOMO95445 188 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 CGB7P0DN87 165 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 AICDAQ9GZX7 198 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 ZG16O60844 167 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 LHBP01229 141 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 FAM201AQ5SY85 155 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 CYB5R2Q6BCY4 276 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 OR5A1Q8NGJ0 315 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 SIGLEC12Q96PQ1 595 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 EDA2RQ9HAV5 297 aa9.56□□□□□ -0.88
PRPF40A-202ENST00000410080 HMSDA8MTL9 139 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 CBLN2Q8IUK8 224 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 ZIC4Q8N9L1 334 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 PLAC1Q9HBJ0 212 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 ATP5LO75964 103 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 ZNF146Q15072 292 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 SURF2Q15527 256 aaPredicted RBP9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 SLIRPQ9GZT3 109 aaKnown RBP9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 LOC390937A0A1W2PQ73 354 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 CTSBP07858 339 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 HBBP68871 147 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 DRAM1Q8N682 238 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 DLL3Q9NYJ7 618 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 PRB4P10163 310 aaPredicted RBP9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 GFI1BQ5VTD9 330 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 CRIM1Q9NZV1 1036 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 MUC1P15941 1255 aaPredicted RBP9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 CXCL3P19876 107 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 NRXN2Q9P2S2 1712 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 PTGDSP41222 190 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 RNF133Q8WVZ7 376 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 CHCHD5Q9BSY4 110 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 KCNK7Q9Y2U2 307 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 F12P00748 615 aaPredicted RBP9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 SMIM13P0DJ93 91 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 C12orf54Q6X4T0 127 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 H1FOOQ8IZA3 346 aaPredicted RBP9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
PRPF40A-202ENST00000410080 OGG1O15527 345 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 VSIG8P0DPA2 414 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 FOLR2P14207 255 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 CSRP2Q16527 193 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 LEMD1Q68G75 181 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 SPSB2Q99619 263 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 MYOD1P15172 320 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 TNFRSF9Q07011 255 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 TUBD1Q9UJT1 453 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 SRIP30626 198 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 CD300LDQ6UXZ3 194 aa9.54□□□□□ -0.88
PRPF40A-202ENST00000410080 SP7Q8TDD2 431 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms